RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.34
VAPA-201ENST00000340541 ZNF391Q9UJN7 358 aa12.9□□□□□ -0.34
VAPA-201ENST00000340541 TRAV20A0A0B4J274 112 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 A0A1W2PQL4 384 aaPredicted RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 ANKRD65E5RJM6 399 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 J3QRE1 110 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 CST4P01036 141 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 TTRP02766 147 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 ANPEPP15144 967 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 SEC61A1P61619 476 aaKnown RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 SRSF2Q01130 221 aaKnown RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 C11orf53Q8IXP5 236 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 ENTHD1Q8IYW4 607 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 MUC20Q8N307 709 aaPredicted RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 ITPKCQ96DU7 683 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 FGF23Q9GZV9 251 aaPredicted RBP12.89□□□□□ -0.35
VAPA-201ENST00000340541 FN3KRPQ9HA64 309 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 GMPPBQ9Y5P6 360 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 R4GMQ9 66 aa12.89□□□□□ -0.35
VAPA-201ENST00000340541 PPIAL4EA0A075B759 164 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.88□□□□□ -0.35
VAPA-201ENST00000340541 CEACAM18A8MTB9 384 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 PPIAL4DF5H284 164 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 PPIAL4FP0DN26 164 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 ZNF85Q03923 595 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 MEDAGQ5VYS4 303 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 ZNF826PQ6ZT77 177 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 C1orf87Q8N0U7 546 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 OR10H4Q8NGA5 316 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 OR11L1Q8NGX0 322 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 TMEM246Q9BRR3 403 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 PAPOLGQ9BWT3 736 aaKnown RBP12.88□□□□□ -0.35
VAPA-201ENST00000340541 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 C14orf119Q9NWQ9 140 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 FAM118AQ9NWS6 357 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 C1orf123Q9NWV4 160 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 RNF7Q9UBF6 113 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.88□□□□□ -0.355e-9■□□□□ 10.1
VAPA-201ENST00000340541 PPIAL4AQ9Y536 164 aa12.88□□□□□ -0.35
VAPA-201ENST00000340541 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 ZNF850A8MQ14 1090 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 SLC16A6O15403 523 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 GRPP07492 148 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 WNT2P09544 360 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 MTNR1AP48039 350 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 ISL1P61371 349 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 LCN2P80188 198 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 ZNF154Q13106 437 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 PRDX4Q13162 271 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 C1orf229Q6ZS94 237 aaPredicted RBP12.87□□□□□ -0.35
VAPA-201ENST00000340541 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 GALNT4Q8N4A0 578 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 GCSAMQ8N6F7 178 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 C19orf18Q8NEA5 215 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 OR1M1Q8NGA1 313 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 OR8S1Q8NH09 359 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 OR51E1Q8TCB6 317 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 HPSE2Q8WWQ2 592 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
VAPA-201ENST00000340541 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 TLNRD1Q9H1K6 362 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 MOB1AQ9H8S9 216 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 OR52A1Q9UKL2 312 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
VAPA-201ENST00000340541 MPC1Q9Y5U8 109 aa12.87□□□□□ -0.35
VAPA-201ENST00000340541 ANK2Q01484 3957 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 DOCK11Q5JSL3 2073 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 METTL15A6NJ78 407 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 A8MXK9 166 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 SULT1C4O75897 302 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 AVPP01185 164 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 LHBP01229 141 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 KRT8P05787 483 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 IRF2P14316 349 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 ATP6V1E1P36543 226 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 GNALP38405 381 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 CSNK2BP67870 215 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 MZT1Q08AG7 82 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 RCN1Q15293 331 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 SNCBQ16143 134 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 BCL2L15Q5TBC7 163 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 LPCAT4Q643R3 524 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 Q6ZSR3 168 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 YIPF7Q8N8F6 280 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 APH1BQ8WW43 257 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 RORBQ92753 470 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 ITFG2Q969R8 447 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms