RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 OR51A2Q8NGJ7 313 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 MFSD8Q8NHS3 518 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 ST8SIA1Q92185 356 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 CMKLR1Q99788 373 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 MOB1AQ9H8S9 216 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 PNO1Q9NRX1 252 aaKnown RBP9.21□□□□□ -0.93
SKA1-201ENST00000285116 FAM206AQ9NX38 181 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 CGGBP1Q9UFW8 167 aaPredicted RBP9.21□□□□□ -0.93
SKA1-201ENST00000285116 CEP295Q9C0D2 2601 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 TMEM14DPA8MWL7 114 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 B4DGG1 531 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.93
SKA1-201ENST00000285116 ETV3LQ6ZN32 361 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 ANGPTL5Q86XS5 388 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 ADAD2Q8NCV1 583 aaKnown RBP9.21□□□□□ -0.93
SKA1-201ENST00000285116 RNF138Q8WVD3 245 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 DAZLQ92904 295 aaKnown RBP9.21□□□□□ -0.93
SKA1-201ENST00000285116 PPP1R14AQ96A00 147 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 AKR1E2Q96JD6 320 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 TBL1XR1Q9BZK7 514 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 UBE2ZQ9H832 354 aaPredicted RBP9.21□□□□□ -0.93
SKA1-201ENST00000285116 OR2S2Q9NQN1 319 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 PARP11Q9NR21 331 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 CUTCQ9NTM9 273 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 TREM2Q9NZC2 230 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 SLC5A6Q9Y289 635 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 EMC9Q9Y3B6 208 aa9.21□□□□□ -0.93
SKA1-201ENST00000285116 A0A1W2PPC4 97 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 MSGN1A6NI15 193 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 CHRM2P08172 466 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 ACKR3P25106 362 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 LAP3P28838 519 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 PPM1FP49593 454 aaPredicted RBP9.21□□□□□ -0.94
SKA1-201ENST00000285116 RAB5CP51148 216 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 UNC119Q13432 240 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 FAM189A2Q15884 450 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 VAX1Q5SQQ9 334 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 TRAPPC6BQ86SZ2 158 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 OR1N1Q8NGS0 311 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 TMEM234Q8WY98 164 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 SGK3Q96BR1 496 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 MALSU1Q96EH3 234 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 NKX3-1Q99801 234 aaPredicted RBP9.21□□□□□ -0.94
SKA1-201ENST00000285116 OR8D2Q9GZM6 311 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 FSCN3Q9NQT6 498 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 CD207Q9UJ71 328 aa9.21□□□□□ -0.94
SKA1-201ENST00000285116 COA3Q9Y2R0 106 aaPredicted RBP9.21□□□□□ -0.94
SKA1-201ENST00000285116 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 A0A1W2PNV4 684 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 A6NLC8 198 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 C9JQL5 133 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 MS4A18H0YCH9 400 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 TAAR5O14804 337 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 LRP3O75074 770 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 GSTP1P09211 210 aaKnown RBP9.2□□□□□ -0.94
SKA1-201ENST00000285116 ZNF823P16415 610 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 AKR1C3P42330 323 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 HTR5AP47898 357 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 SULT1A2P50226 295 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 PLCXD2Q0VAA5 305 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 MS4A18Q3C1V0 323 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 KRBOX4Q5JUW0 171 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 SMRP1Q8NCR6 262 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 KLHDC7BQ96G42 594 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 PFDN5Q99471 154 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 SLC5A7Q9GZV3 580 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 CNTD2Q9H8S5 307 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 SEMA5BQ9P283 1151 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 ATMQ13315 3056 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 IGHV5-51A0A0C4DH38 117 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 TMEM269A0A1B0GVZ9 245 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 ANKUB1A6NFN9 424 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 RHPN2P1A8MT19 583 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 PPIHO43447 177 aaKnown RBP9.2□□□□□ -0.94
SKA1-201ENST00000285116 NME1P15531 152 aaKnown RBP9.2□□□□□ -0.94
SKA1-201ENST00000285116 NME2P22392 152 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 Q3ZCU0 254 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 AWAT1Q58HT5 328 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 HLA-DQA1Q5Y7H0 255 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 TMPPEQ6ZT21 453 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 GKN2Q86XP6 184 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 ARRDC1Q8N5I2 433 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 JAGN1Q8N5M9 183 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 ZNF248Q8NDW4 579 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 ADPRHL1Q8NDY3 354 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 OPA3Q9H6K4 179 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 TAF9BQ9HBM6 251 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 RAB18Q9NP72 206 aa9.2□□□□□ -0.94
SKA1-201ENST00000285116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.2□□□□□ -0.94
SKA1-201ENST00000285116 DCDC2BA2VCK2 349 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 AGPAT2O15120 278 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 IFNA6P05013 189 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 SERPINA5P05154 406 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 DEFA6Q01524 100 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 SPOCK1Q08629 439 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
SKA1-201ENST00000285116 DCXRQ7Z4W1 244 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms