RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 ERG20P08524 352 aaKnown RBP0.34□□□□□ -2.36
snR38snR38 YER190C-BP0CX94 160 aa0.34□□□□□ -2.36
snR38snR38 YEL077W-AP0CX95 160 aa0.34□□□□□ -2.36
snR38snR38 YGR296C-BP0CX96 160 aa0.34□□□□□ -2.36
snR38snR38 YPL283W-BP0CX97 160 aa0.34□□□□□ -2.36
snR38snR38 YPR204C-AP0CX98 160 aa0.34□□□□□ -2.36
snR38snR38 TRZ1P36159 838 aaPredicted RBP0.34□□□□□ -2.36
snR38snR38 ERP5P38819 212 aa0.34□□□□□ -2.36
snR38snR38 CRP1P38845 465 aaKnown RBP0.34□□□□□ -2.36
snR38snR38 TES1P41903 349 aaKnown RBP0.34□□□□□ -2.36
snR38snR38 MTR3P48240 250 aaPredicted RBP0.34□□□□□ -2.36
snR38snR38 TYW3P53177 273 aa0.34□□□□□ -2.36
snR38snR38 MTL1P53214 551 aa0.34□□□□□ -2.36
snR38snR38 CPR8P53728 308 aa0.34□□□□□ -2.36
snR38snR38 YDR179W-AQ03983 463 aa0.34□□□□□ -2.36
snR38snR38 YLR281CQ05863 155 aa0.34□□□□□ -2.36
snR38snR38 TIP41Q12199 356 aa0.34□□□□□ -2.36
snR38snR38 PUF2Q12221 1075 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
snR38snR38 YMR084WA2P2R3 262 aa0.33□□□□□ -2.36
snR38snR38 YCR043CP25361 127 aa0.33□□□□□ -2.36
snR38snR38 LOT5P34234 306 aa0.33□□□□□ -2.36
snR38snR38 RKM3P38222 552 aa0.33□□□□□ -2.36
snR38snR38 RIM4P38741 713 aa0.33□□□□□ -2.36
snR38snR38 HOS2P53096 452 aaPredicted RBP0.33□□□□□ -2.36
snR38snR38 TPO2P53283 614 aa0.33□□□□□ -2.36
snR38snR38 BSP1Q06604 576 aa0.33□□□□□ -2.36
snR38snR38 STP4Q07351 490 aa0.33□□□□□ -2.36
snR38snR38 YDL086WQ07505 273 aa0.33□□□□□ -2.36
snR38snR38 HAL9Q12180 1030 aa0.33□□□□□ -2.36
snR38snR38 YBL113CQ7M4S9 792 aa0.33□□□□□ -2.36
snR38snR38 PRC1P00729 532 aa0.32□□□□□ -2.36
snR38snR38 YMR085WP0CF18 432 aa0.32□□□□□ -2.36
snR38snR38 AIM17P23180 465 aaKnown RBP0.32□□□□□ -2.36
snR38snR38 CPR3P25719 182 aa0.32□□□□□ -2.36
snR38snR38 CYS3P31373 394 aaKnown RBP0.32□□□□□ -2.36
snR38snR38 SWH1P35845 1188 aa0.32□□□□□ -2.36
snR38snR38 YBR184WP38299 523 aa0.32□□□□□ -2.36
snR38snR38 LYS9P38999 446 aa0.32□□□□□ -2.36
snR38snR38 YIL152WP40455 235 aa0.32□□□□□ -2.36
snR38snR38 OPT1P40897 799 aa0.32□□□□□ -2.36
snR38snR38 YJL043WP47053 257 aa0.32□□□□□ -2.36
snR38snR38 PRP31P49704 494 aaPredicted RBP0.32□□□□□ -2.36
snR38snR38 YGL117WP53133 265 aa0.32□□□□□ -2.36
snR38snR38 CRZ1P53968 678 aa0.32□□□□□ -2.36
snR38snR38 YSH1Q06224 779 aaPredicted RBP0.32□□□□□ -2.36
snR38snR38 PMA2P19657 947 aa0.31□□□□□ -2.36
snR38snR38 PRP28P23394 588 aa0.31□□□□□ -2.36
snR38snR38 NTH1P32356 751 aa0.31□□□□□ -2.36
snR38snR38 HES1P35843 434 aa0.31□□□□□ -2.36
snR38snR38 PIG2P40187 538 aa0.31□□□□□ -2.36
snR38snR38 COP1P53622 1201 aaKnown RBP0.31□□□□□ -2.36
snR38snR38 IGO1P53897 168 aa0.31□□□□□ -2.36
snR38snR38 RPL15BP54780 204 aaPredicted RBP0.31□□□□□ -2.36
snR38snR38 DAK1P54838 584 aaKnown RBP0.31□□□□□ -2.36
snR38snR38 TPO3Q06451 622 aa0.31□□□□□ -2.36
snR38snR38 FAB1P34756 2278 aa0.31□□□□□ -2.36
snR38snR38 CYC8P14922 966 aa0.3□□□□□ -2.36
snR38snR38 MET4P32389 672 aa0.3□□□□□ -2.36
snR38snR38 SRP40P32583 406 aaPredicted RBP0.3□□□□□ -2.36
snR38snR38 APL2P36000 726 aaPredicted RBP0.3□□□□□ -2.36
snR38snR38 SCO2P38072 301 aa0.3□□□□□ -2.36
snR38snR38 YHL050CP38721 697 aa0.3□□□□□ -2.36
snR38snR38 YHR219WP38900 624 aa0.3□□□□□ -2.36
snR38snR38 YIL092WP40497 633 aa0.3□□□□□ -2.36
snR38snR38 NOG2P53742 486 aaKnown RBP0.3□□□□□ -2.36
snR38snR38 NAN1Q02931 896 aaKnown RBP0.3□□□□□ -2.36
snR38snR38 UFO1Q04511 668 aa0.3□□□□□ -2.36
snR38snR38 DIA2Q08496 732 aaPredicted RBP0.3□□□□□ -2.36
snR38snR38 ATX2Q12067 313 aa0.3□□□□□ -2.36
snR38snR38 RKI1Q12189 258 aa0.3□□□□□ -2.36
snR38snR38 YOR022CQ12204 715 aa0.3□□□□□ -2.36
snR38snR38 RPL7AP05737 244 aaKnown RBP0.29□□□□□ -2.36
snR38snR38 TOP3P13099 656 aa0.29□□□□□ -2.36
snR38snR38 NPP1P25353 742 aa0.29□□□□□ -2.36
snR38snR38 VBA3P25594 458 aa0.29□□□□□ -2.36
snR38snR38 AAR2P32357 355 aaPredicted RBP0.29□□□□□ -2.36
snR38snR38 VBA5P36172 582 aa0.29□□□□□ -2.36
snR38snR38 MRPL7P36519 292 aa0.29□□□□□ -2.36
snR38snR38 YRO2P38079 344 aa0.29□□□□□ -2.36
snR38snR38 CTP1P38152 299 aa0.29□□□□□ -2.36
snR38snR38 PIH1P38768 344 aa0.29□□□□□ -2.36
snR38snR38 THI6P41835 540 aa0.29□□□□□ -2.36
snR38snR38 IRC7P43623 340 aa0.29□□□□□ -2.36
snR38snR38 GUS1P46655 708 aaKnown RBP RIP-Chip data0.29□□□□□ -2.36not detected
snR38snR38 VPS16Q03308 798 aa0.29□□□□□ -2.36
snR38snR38 YDR306CQ06640 478 aa0.29□□□□□ -2.36
snR38snR38 MCM21Q06675 368 aa0.29□□□□□ -2.36
snR38snR38 MLH2Q07980 695 aa0.29□□□□□ -2.36
snR38snR38 RPL7BQ12213 244 aaKnown RBP0.29□□□□□ -2.36
snR38snR38 RDL1Q12305 139 aaKnown RBP0.29□□□□□ -2.36
snR38snR38 AQY1P0CD91 305 aa0.28□□□□□ -2.36
snR38snR38 CBS2P14905 389 aa0.28□□□□□ -2.36
snR38snR38 PEX1P24004 1043 aa0.28□□□□□ -2.36
snR38snR38 GSY2P27472 705 aa0.28□□□□□ -2.36
snR38snR38 PPX1P38698 397 aa0.28□□□□□ -2.36
snR38snR38 YHR112CP38716 378 aa0.28□□□□□ -2.36
snR38snR38 GND1P38720 489 aaKnown RBP0.28□□□□□ -2.36
snR38snR38 YHR097CP38809 366 aaKnown RBP0.28□□□□□ -2.36
snR38snR38 MTC6P38849 526 aa0.28□□□□□ -2.36
snR38snR38 THI12P42883 340 aa0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 117 ms