RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W UBP6P43593 499 aaKnown RBP3.4□□□□□ -1.87
PEP12YOR036W NET1P47035 1189 aa3.4□□□□□ -1.87
PEP12YOR036W DNM1P54861 757 aa3.4□□□□□ -1.87
PEP12YOR036W MLH3Q12083 715 aa3.4□□□□□ -1.87
PEP12YOR036W RPL8AP17076 256 aaKnown RBP3.39□□□□□ -1.87
PEP12YOR036W PEX6P33760 1030 aa3.39□□□□□ -1.87
PEP12YOR036W PHO11P35842 467 aa3.39□□□□□ -1.87
PEP12YOR036W PHO12P38693 467 aa3.39□□□□□ -1.87
PEP12YOR036W MUP3P38734 546 aa3.39□□□□□ -1.87
PEP12YOR036W ECM1P39715 212 aa3.39□□□□□ -1.87
PEP12YOR036W LTP1P40347 161 aa3.39□□□□□ -1.87
PEP12YOR036W YGR283CP53336 341 aaPredicted RBP3.39□□□□□ -1.87
PEP12YOR036W TDA9Q04545 1251 aa3.39□□□□□ -1.87
PEP12YOR036W CIR2Q08822 631 aa3.39□□□□□ -1.87
PEP12YOR036W YBR182C-AQ8TGU6 64 aa3.39□□□□□ -1.87
PEP12YOR036W MDM12Q92328 271 aa3.39□□□□□ -1.87
PEP12YOR036W TOM70P07213 617 aaKnown RBP3.38□□□□□ -1.87
PEP12YOR036W MEF1P25039 761 aa3.38□□□□□ -1.87
PEP12YOR036W TOM20P35180 183 aa3.38□□□□□ -1.87
PEP12YOR036W CRP1P38845 465 aaKnown RBP3.38□□□□□ -1.87
PEP12YOR036W XBP1P40489 647 aa3.38□□□□□ -1.87
PEP12YOR036W ZDS1P50111 915 aaKnown RBP3.38□□□□□ -1.87
PEP12YOR036W ZIP2P53061 704 aa3.38□□□□□ -1.87
PEP12YOR036W TFB2Q02939 513 aa3.38□□□□□ -1.87
PEP12YOR036W ADR1P07248 1323 aa3.38□□□□□ -1.87
PEP12YOR036W PGK1P00560 416 aaKnown RBP3.37□□□□□ -1.87
PEP12YOR036W CCR4P31384 837 aaKnown RBP3.37□□□□□ -1.87
PEP12YOR036W SPC29P33419 253 aa3.37□□□□□ -1.87
PEP12YOR036W YHR112CP38716 378 aa3.37□□□□□ -1.87
PEP12YOR036W NUP60P39705 539 aa3.37□□□□□ -1.87
PEP12YOR036W YNR029CP53729 429 aaKnown RBP3.37□□□□□ -1.87
PEP12YOR036W MPS1P54199 764 aa3.37□□□□□ -1.87
PEP12YOR036W YLR149CQ99296 730 aa3.37□□□□□ -1.87
PEP12YOR036W THR1P17423 357 aaKnown RBP3.36□□□□□ -1.87
PEP12YOR036W ADE2P21264 571 aaKnown RBP3.36□□□□□ -1.87
PEP12YOR036W SFP1P32432 683 aa3.36□□□□□ -1.87
PEP12YOR036W PAF1P38351 445 aa3.36□□□□□ -1.87
PEP12YOR036W YEN1P40028 759 aa3.36□□□□□ -1.87
PEP12YOR036W ALG2P43636 503 aa3.36□□□□□ -1.87
PEP12YOR036W HXT16P47185 567 aa3.36□□□□□ -1.87
PEP12YOR036W PRP31P49704 494 aaPredicted RBP3.36□□□□□ -1.87
PEP12YOR036W YNL193WP53870 558 aa3.36□□□□□ -1.87
PEP12YOR036W CTK1Q03957 528 aaKnown RBP3.36□□□□□ -1.87
PEP12YOR036W YLR001CQ07895 862 aa3.36□□□□□ -1.87
PEP12YOR036W USV1Q12132 391 aa3.36□□□□□ -1.87
PEP12YOR036W NUP1P20676 1076 aa3.35□□□□□ -1.87
PEP12YOR036W GSY1P23337 708 aa3.35□□□□□ -1.87
PEP12YOR036W ERG6P25087 383 aaKnown RBP3.35□□□□□ -1.87
PEP12YOR036W FUB1P25659 250 aa3.35□□□□□ -1.87
PEP12YOR036W SET3P36124 751 aa3.35□□□□□ -1.87
PEP12YOR036W STB2P46679 850 aa3.35□□□□□ -1.87
PEP12YOR036W ATG36P46983 293 aa3.35□□□□□ -1.87
PEP12YOR036W HRP1Q99383 534 aaKnown RBP3.35□□□□□ -1.87
PEP12YOR036W MRC1P25588 1096 aa3.34□□□□□ -1.87
PEP12YOR036W RGT1P32862 1170 aa3.34□□□□□ -1.87
PEP12YOR036W YEL1P34225 687 aa3.34□□□□□ -1.87
PEP12YOR036W SHR5P41912 237 aa3.34□□□□□ -1.87
PEP12YOR036W PMT3P47190 753 aa3.34□□□□□ -1.87
PEP12YOR036W ATP25Q03153 612 aa3.34□□□□□ -1.87
PEP12YOR036W REH1Q06709 432 aa3.34□□□□□ -1.87
PEP12YOR036W SLK19Q08581 821 aaKnown RBP3.34□□□□□ -1.87
PEP12YOR036W GEP3Q08622 556 aa3.34□□□□□ -1.87
PEP12YOR036W CDC9P04819 755 aa3.33□□□□□ -1.88
PEP12YOR036W VBA3P25594 458 aa3.33□□□□□ -1.88
PEP12YOR036W APL2P36000 726 aaPredicted RBP3.33□□□□□ -1.88
PEP12YOR036W ENP1P38333 483 aaKnown RBP3.33□□□□□ -1.88
PEP12YOR036W DSS1P39112 969 aa3.33□□□□□ -1.88
PEP12YOR036W MGS1P40151 587 aa3.33□□□□□ -1.88
PEP12YOR036W TY4A-JP47023 414 aa3.33□□□□□ -1.88
PEP12YOR036W YJR008WP47085 338 aa3.33□□□□□ -1.88
PEP12YOR036W HLJ1P48353 224 aa3.33□□□□□ -1.88
PEP12YOR036W YBP2P53169 641 aa3.33□□□□□ -1.88
PEP12YOR036W SRD1P09007 221 aa3.32□□□□□ -1.88
PEP12YOR036W STE12P13574 688 aa3.32□□□□□ -1.88
PEP12YOR036W RPA135P22138 1203 aaKnown RBP3.32□□□□□ -1.88
PEP12YOR036W MTC2P34246 357 aa3.32□□□□□ -1.88
PEP12YOR036W GMH1P36125 273 aa3.32□□□□□ -1.88
PEP12YOR036W RLP7P40693 322 aaKnown RBP3.32□□□□□ -1.88
PEP12YOR036W YGR237CP50089 785 aa3.32□□□□□ -1.88
PEP12YOR036W ARG5,6Q01217 863 aa3.32□□□□□ -1.88
PEP12YOR036W FMP30Q02883 468 aa3.32□□□□□ -1.88
PEP12YOR036W YDR514CQ04408 483 aa3.32□□□□□ -1.88
PEP12YOR036W YDR338CQ05497 695 aa3.32□□□□□ -1.88
PEP12YOR036W THI73Q07904 523 aa3.32□□□□□ -1.88
PEP12YOR036W MET7Q08645 548 aa3.32□□□□□ -1.88
PEP12YOR036W ZRT2Q12436 422 aa3.32□□□□□ -1.88
PEP12YOR036W DIF1O13577 133 aa3.31□□□□□ -1.88
PEP12YOR036W APN1P22936 367 aa3.31□□□□□ -1.88
PEP12YOR036W PCL2P25693 308 aa3.31□□□□□ -1.88
PEP12YOR036W YMC1P32331 307 aa3.31□□□□□ -1.88
PEP12YOR036W TRZ1P36159 838 aaPredicted RBP3.31□□□□□ -1.88
PEP12YOR036W MIT1P40002 666 aa3.31□□□□□ -1.88
PEP12YOR036W GET2P40056 285 aa3.31□□□□□ -1.88
PEP12YOR036W NOP2P40991 618 aaKnown RBP3.31□□□□□ -1.88
PEP12YOR036W CAF16P43569 289 aa3.31□□□□□ -1.88
PEP12YOR036W GPG1P53130 126 aa3.31□□□□□ -1.88
PEP12YOR036W SDA1P53313 767 aaKnown RBP3.31□□□□□ -1.88
PEP12YOR036W UME1Q03010 460 aa3.31□□□□□ -1.88
PEP12YOR036W COG8Q04632 607 aa3.31□□□□□ -1.88
PEP12YOR036W NUP145P49687 1317 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms