RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C RGA2Q06407 1009 aa1.49□□□□□ -2.17
NUP188YML103C TSR2Q06672 205 aaKnown RBP1.49□□□□□ -2.17
NUP188YML103C XYL2Q07993 356 aa1.49□□□□□ -2.17
NUP188YML103C GPB1Q08886 897 aa1.49□□□□□ -2.17
NUP188YML103C NEW1Q08972 1196 aaKnown RBP1.49□□□□□ -2.17
NUP188YML103C PYC1P11154 1178 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C TRX2P22803 104 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C IMP2'P32351 346 aa1.48□□□□□ -2.17
NUP188YML103C SEG2P34250 1132 aa1.48□□□□□ -2.17
NUP188YML103C NOP4P37838 685 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C TY4A-JP47023 414 aa1.48□□□□□ -2.17
NUP188YML103C MAP1Q01662 387 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
NUP188YML103C YPL062WQ02781 134 aa1.48□□□□□ -2.17
NUP188YML103C ARA2Q04212 335 aa1.48□□□□□ -2.17
NUP188YML103C YDR338CQ05497 695 aa1.48□□□□□ -2.17
NUP188YML103C ACK1Q07622 623 aaPredicted RBP1.48□□□□□ -2.17
NUP188YML103C GAL10P04397 699 aa1.48□□□□□ -2.17
NUP188YML103C RER1P25560 188 aa1.48□□□□□ -2.17
NUP188YML103C MSH1P25846 959 aa1.48□□□□□ -2.17
NUP188YML103C TGL1P34163 548 aa1.48□□□□□ -2.17
NUP188YML103C LAM1P38851 1228 aa1.48□□□□□ -2.17
NUP188YML103C NPP2P39997 493 aa1.48□□□□□ -2.17
NUP188YML103C YIR042CP40586 236 aa1.48□□□□□ -2.17
NUP188YML103C IES1P43579 692 aa1.48□□□□□ -2.17
NUP188YML103C PRP43P53131 767 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C TEP1P53916 434 aa1.48□□□□□ -2.17
NUP188YML103C ARG5,6Q01217 863 aa1.48□□□□□ -2.17
NUP188YML103C MTD1Q02046 320 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C GCN5Q03330 439 aa1.48□□□□□ -2.17
NUP188YML103C CRR1Q05790 422 aa1.48□□□□□ -2.17
NUP188YML103C RCL1Q08096 367 aaPredicted RBP1.48□□□□□ -2.17
NUP188YML103C YOR022CQ12204 715 aa1.48□□□□□ -2.17
NUP188YML103C SFI1Q12369 946 aa1.48□□□□□ -2.17
NUP188YML103C LPX1Q12405 387 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C YLR149CQ99296 730 aa1.48□□□□□ -2.17
NUP188YML103C GAL1P04385 528 aa1.48□□□□□ -2.17
NUP188YML103C BIK1P11709 440 aa1.48□□□□□ -2.17
NUP188YML103C ABF1P14164 731 aa1.48□□□□□ -2.17
NUP188YML103C CMP2P14747 604 aa1.48□□□□□ -2.17
NUP188YML103C PRP28P23394 588 aa1.48□□□□□ -2.17
NUP188YML103C PHO3P24031 467 aa1.48□□□□□ -2.17
NUP188YML103C RAD16P31244 790 aa1.48□□□□□ -2.17
NUP188YML103C RPN12P32496 274 aa1.48□□□□□ -2.17
NUP188YML103C TFC4P33339 1025 aa1.48□□□□□ -2.17
NUP188YML103C MDJ1P35191 511 aa1.48□□□□□ -2.17
NUP188YML103C FUI1P38196 639 aa1.48□□□□□ -2.17
NUP188YML103C UME6P39001 836 aa1.48□□□□□ -2.17
NUP188YML103C CEP3P40969 608 aa1.48□□□□□ -2.17
NUP188YML103C PXA1P41909 870 aa1.48□□□□□ -2.17
NUP188YML103C PEF1P53238 335 aa1.48□□□□□ -2.17
NUP188YML103C LRS4Q04087 347 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C GAS5Q08193 484 aa1.48□□□□□ -2.17
NUP188YML103C SGO1Q08490 590 aa1.48□□□□□ -2.17
NUP188YML103C BUD21Q08492 214 aaPredicted RBP1.48□□□□□ -2.17
NUP188YML103C DCS2Q12123 353 aa1.48□□□□□ -2.17
NUP188YML103C ZRT2Q12436 422 aa1.48□□□□□ -2.17
NUP188YML103C CYC7P00045 113 aa1.48□□□□□ -2.17
NUP188YML103C SOD2P00447 233 aa1.48□□□□□ -2.17
NUP188YML103C STE14P32584 239 aa1.48□□□□□ -2.17
NUP188YML103C FSH1P38777 243 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C HXT6P39003 570 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C HXT7P39004 570 aa1.48□□□□□ -2.17
NUP188YML103C IMA1P53051 589 aa1.48□□□□□ -2.17
NUP188YML103C AIM14P53109 570 aa1.48□□□□□ -2.17
NUP188YML103C NOP15P53927 220 aaPredicted RBP1.48□□□□□ -2.17
NUP188YML103C CLU1Q03690 1277 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C HMO1Q03973 246 aaKnown RBP1.48□□□□□ -2.17
NUP188YML103C HOS1Q12214 470 aa1.48□□□□□ -2.17
NUP188YML103C PIF1P07271 859 aa1.47□□□□□ -2.17
NUP188YML103C CBP3P21560 335 aa1.47□□□□□ -2.17
NUP188YML103C YKR051WP36142 418 aa1.47□□□□□ -2.17
NUP188YML103C AKL1P38080 1108 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C PRP31P49704 494 aaPredicted RBP1.47□□□□□ -2.17
NUP188YML103C UBA2P52488 636 aa1.47□□□□□ -2.17
NUP188YML103C SQS1P53866 767 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C FDC1Q03034 503 aa1.47□□□□□ -2.17
NUP188YML103C CTK1Q03957 528 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C PRE10P21242 288 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
NUP188YML103C VPS34P22543 875 aa1.47□□□□□ -2.17
NUP188YML103C GFD2P25370 566 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C NUP120P35729 1037 aa1.47□□□□□ -2.17
NUP188YML103C DHR2P36009 735 aaPredicted RBP1.47□□□□□ -2.17
NUP188YML103C PSY4P38193 441 aa1.47□□□□□ -2.17
NUP188YML103C TOS1P38288 455 aa1.47□□□□□ -2.17
NUP188YML103C PRY1P47032 299 aa1.47□□□□□ -2.17
NUP188YML103C TAF4P50105 388 aa1.47□□□□□ -2.17
NUP188YML103C YNL034WP53963 612 aa1.47□□□□□ -2.17
NUP188YML103C YNL018CP53976 612 aa1.47□□□□□ -2.17
NUP188YML103C YDR132CQ03900 495 aa1.47□□□□□ -2.17
NUP188YML103C EIS1Q05050 843 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
NUP188YML103C HMI1Q12039 706 aa1.47□□□□□ -2.17
NUP188YML103C VAS1P07806 1104 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C MTF2P10849 440 aa1.47□□□□□ -2.17
NUP188YML103C LAT1P12695 482 aaKnown RBP1.47□□□□□ -2.17
NUP188YML103C PFK2P16862 959 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
NUP188YML103C MF(ALPHA)2P32435 120 aa1.47□□□□□ -2.17
NUP188YML103C RRN3P36070 627 aa1.47□□□□□ -2.17
NUP188YML103C PRM2P40534 656 aa1.47□□□□□ -2.17
NUP188YML103C HIS6P40545 261 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms