RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W IES1P43579 692 aa5.86□□□□□ -1.47
VPS36YLR417W CTH1P47976 325 aa5.86□□□□□ -1.47
VPS36YLR417W PRP31P49704 494 aaPredicted RBP5.86□□□□□ -1.47
VPS36YLR417W YDL121CQ07541 149 aa5.86□□□□□ -1.47
VPS36YLR417W MSS18P08593 268 aa5.85□□□□□ -1.47
VPS36YLR417W DGR2P32330 852 aa5.85□□□□□ -1.47
VPS36YLR417W MSS4P38994 779 aa5.85□□□□□ -1.47
VPS36YLR417W QRI7P43122 407 aa5.85□□□□□ -1.47
VPS36YLR417W MRPL22P53881 309 aa5.85□□□□□ -1.47
VPS36YLR417W ARG5,6Q01217 863 aa5.85□□□□□ -1.47
VPS36YLR417W GCN5Q03330 439 aa5.85□□□□□ -1.47
VPS36YLR417W NGL1Q08213 363 aaKnown RBP5.85□□□□□ -1.47
VPS36YLR417W CWC2Q12046 339 aaPredicted RBP5.85□□□□□ -1.47
VPS36YLR417W ACO1P19414 778 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
VPS36YLR417W PRP4P20053 465 aaKnown RBP5.85□□□□□ -1.47
VPS36YLR417W MF(ALPHA)2P32435 120 aa5.85□□□□□ -1.47
VPS36YLR417W KTR4P38131 464 aa5.85□□□□□ -1.47
VPS36YLR417W SIC1P38634 284 aa5.85□□□□□ -1.47
VPS36YLR417W DUN1P39009 513 aa5.85□□□□□ -1.47
VPS36YLR417W ECM1P39715 212 aa5.85□□□□□ -1.47
VPS36YLR417W ACA1P39970 489 aa5.85□□□□□ -1.47
VPS36YLR417W IRC5P43610 853 aa5.85□□□□□ -1.47
VPS36YLR417W EXG2P52911 562 aa5.85□□□□□ -1.47
VPS36YLR417W REC102Q02721 264 aa5.85□□□□□ -1.47
VPS36YLR417W MCM21Q06675 368 aa5.85□□□□□ -1.47
VPS36YLR417W ISA1Q07821 250 aaPredicted RBP5.85□□□□□ -1.47
VPS36YLR417W ADE2P21264 571 aaKnown RBP5.84□□□□□ -1.47
VPS36YLR417W YKL222CP35995 705 aa5.84□□□□□ -1.47
VPS36YLR417W APL2P36000 726 aaPredicted RBP5.84□□□□□ -1.47
VPS36YLR417W YIL092WP40497 633 aa5.84□□□□□ -1.47
VPS36YLR417W ASK10P48361 1146 aa5.84□□□□□ -1.47
VPS36YLR417W CEG1Q01159 459 aaPredicted RBP5.84□□□□□ -1.47
VPS36YLR417W YPS7Q06325 596 aa5.84□□□□□ -1.47
VPS36YLR417W PEX19Q07418 342 aa5.84□□□□□ -1.47
VPS36YLR417W ACK1Q07622 623 aaPredicted RBP5.84□□□□□ -1.47
VPS36YLR417W VHS3Q08438 674 aa5.84□□□□□ -1.47
VPS36YLR417W YOL114CQ12322 202 aa5.84□□□□□ -1.47
VPS36YLR417W NPC2Q12408 173 aa5.84□□□□□ -1.47
VPS36YLR417W NKP1Q12493 238 aa5.84□□□□□ -1.47
VPS36YLR417W DFG16Q99234 619 aa5.84□□□□□ -1.47
VPS36YLR417W PYC1P11154 1178 aaKnown RBP5.83□□□□□ -1.48
VPS36YLR417W PHO81P17442 1178 aa5.83□□□□□ -1.48
VPS36YLR417W HXT4P32467 576 aa5.83□□□□□ -1.48
VPS36YLR417W PET127P32606 800 aa5.83□□□□□ -1.48
VPS36YLR417W LIP5P32875 414 aa5.83□□□□□ -1.48
VPS36YLR417W STL1P39932 569 aa5.83□□□□□ -1.48
VPS36YLR417W YDR132CQ03900 495 aa5.83□□□□□ -1.48
VPS36YLR417W OMS1Q06668 471 aa5.83□□□□□ -1.48
VPS36YLR417W PET309P32522 965 aaPredicted RBP5.82□□□□□ -1.48
VPS36YLR417W SDS22P36047 338 aa5.82□□□□□ -1.48
VPS36YLR417W APT2P36973 181 aa5.82□□□□□ -1.48
VPS36YLR417W SAW1P39735 261 aa5.82□□□□□ -1.48
VPS36YLR417W PUS4P48567 403 aaKnown RBP5.82□□□□□ -1.48
VPS36YLR417W STP4Q07351 490 aa5.82□□□□□ -1.48
VPS36YLR417W CDC20P26309 610 aa5.82□□□□□ -1.48
VPS36YLR417W DBF20P32328 564 aa5.82□□□□□ -1.48
VPS36YLR417W POL12P38121 705 aaPredicted RBP5.82□□□□□ -1.48
VPS36YLR417W EAF5P39995 279 aa5.82□□□□□ -1.48
VPS36YLR417W TEP1P53916 434 aa5.82□□□□□ -1.48
VPS36YLR417W MTD1Q02046 320 aaKnown RBP5.82□□□□□ -1.48
VPS36YLR417W SLU7Q02775 382 aaKnown RBP5.82□□□□□ -1.48
VPS36YLR417W YAP6Q03935 383 aa5.82□□□□□ -1.48
VPS36YLR417W BRE1Q07457 700 aaKnown RBP5.82□□□□□ -1.48
VPS36YLR417W NUR1Q12066 484 aa5.82□□□□□ -1.48
VPS36YLR417W TRM11Q12463 433 aa5.82□□□□□ -1.48
VPS36YLR417W KCS1Q12494 1050 aa5.82□□□□□ -1.48
VPS36YLR417W YEL076C-AP0CX16 216 aa5.81□□□□□ -1.48
VPS36YLR417W YLR464WP0CX17 216 aa5.81□□□□□ -1.48
VPS36YLR417W FRS1P15624 595 aaKnown RBP5.81□□□□□ -1.48
VPS36YLR417W APA1P16550 321 aaKnown RBP5.81□□□□□ -1.48
VPS36YLR417W PHO3P24031 467 aa5.81□□□□□ -1.48
VPS36YLR417W SSP120P39931 234 aaKnown RBP5.81□□□□□ -1.48
VPS36YLR417W YEL076CP39971 216 aa5.81□□□□□ -1.48
VPS36YLR417W NSE5Q03718 556 aa5.81□□□□□ -1.48
VPS36YLR417W HMO1Q03973 246 aaKnown RBP5.81□□□□□ -1.48
VPS36YLR417W ARP7Q12406 477 aa5.81□□□□□ -1.48
VPS36YLR417W CTF13P35203 478 aa5.8□□□□□ -1.48
VPS36YLR417W YHR112CP38716 378 aa5.8□□□□□ -1.48
VPS36YLR417W RPP1P38786 293 aa5.8□□□□□ -1.48
VPS36YLR417W PLB1P39105 664 aa5.8□□□□□ -1.48
VPS36YLR417W SAP185P40856 1058 aa5.8□□□□□ -1.48
VPS36YLR417W ECL1P48235 211 aa5.8□□□□□ -1.48
VPS36YLR417W NRG1Q03125 231 aa5.8□□□□□ -1.48
VPS36YLR417W HLR1Q04429 423 aa5.8□□□□□ -1.48
VPS36YLR417W PSF3Q12146 194 aa5.8□□□□□ -1.48
VPS36YLR417W IME1P21190 360 aa5.79□□□□□ -1.48
VPS36YLR417W LRG1P35688 1017 aa5.79□□□□□ -1.48
VPS36YLR417W INP52P50942 1183 aa5.79□□□□□ -1.48
VPS36YLR417W SVL3Q03088 825 aaKnown RBP5.79□□□□□ -1.48
VPS36YLR417W PPN1Q04119 674 aa5.79□□□□□ -1.48
VPS36YLR417W SGO1Q08490 590 aa5.79□□□□□ -1.48
VPS36YLR417W MSH1P25846 959 aa5.79□□□□□ -1.48
VPS36YLR417W YPT7P32939 208 aa5.79□□□□□ -1.48
VPS36YLR417W TGL1P34163 548 aa5.79□□□□□ -1.48
VPS36YLR417W VPS27P40343 622 aaKnown RBP5.79□□□□□ -1.48
VPS36YLR417W PXA1P41909 870 aa5.79□□□□□ -1.48
VPS36YLR417W TMA64Q04600 565 aaKnown RBP5.79□□□□□ -1.48
VPS36YLR417W YLR224WQ05947 369 aa5.79□□□□□ -1.48
VPS36YLR417W MSM1P22438 575 aa5.78□□□□□ -1.48
VPS36YLR417W OMA1P36163 345 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms