RNA–Protein interactions for RNA: YLL042C

ATG10, Transcript of Conserved E2-like conjugating enzyme, yeast

Gene ATG10, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG10	YLL042C	LAT1	P12695	482 aa	Known RBP	4.1	□□□□□ -1.75
ATG10	YLL042C	SEC65	P29478	273 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	PMI40	P29952	429 aa	Known RBP	4.1	□□□□□ -1.75
ATG10	YLL042C	YKU70	P32807	602 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	YPT7	P32939	208 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	SER1	P33330	395 aa	Known RBP	4.1	□□□□□ -1.75
ATG10	YLL042C	GET2	P40056	285 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	YNL195C	P40168	261 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	MTL1	P53214	551 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	GPD1	Q00055	391 aa	Known RBP	4.1	□□□□□ -1.75
ATG10	YLL042C	YHM2	Q04013	314 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	YLR407W	Q06070	228 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	RGC1	Q06108	1083 aa	Known RBP	4.1	□□□□□ -1.75
ATG10	YLL042C	YPS7	Q06325	596 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	YLR040C	Q07988	224 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	TRE2	Q08693	809 aa		4.1	□□□□□ -1.75
ATG10	YLL042C	MET3	P08536	511 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
ATG10	YLL042C	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.75
ATG10	YLL042C	TRZ1	P36159	838 aa	Predicted RBP	4.09	□□□□□ -1.75
ATG10	YLL042C	KTR4	P38131	464 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	NOP9	P47077	666 aa	Known RBP	4.09	□□□□□ -1.75
ATG10	YLL042C	AMA1	P50082	593 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	KIN4	Q01919	800 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	REC102	Q02721	264 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	DLT1	Q04216	342 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	ISA1	Q07821	250 aa	Predicted RBP	4.09	□□□□□ -1.75
ATG10	YLL042C	AIM39	Q08223	395 aa		4.09	□□□□□ -1.75
ATG10	YLL042C	IME1	P21190	360 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	PLC1	P32383	869 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	TRM2	P33753	639 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	YKR075C	P36155	307 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	NOP15	P53927	220 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG10	YLL042C	PTA1	Q01329	785 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG10	YLL042C	RCR2	Q03446	210 aa	Known RBP	4.08	□□□□□ -1.76
ATG10	YLL042C	VPS36	Q06696	566 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	IRC13	Q08630	104 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	FRE5	Q08908	694 aa		4.08	□□□□□ -1.76
ATG10	YLL042C	RPS17A	P02407	136 aa	Known RBP	4.07	□□□□□ -1.76
ATG10	YLL042C	GLN4	P13188	809 aa	Known RBP	4.07	□□□□□ -1.76
ATG10	YLL042C	RPS17B	P14127	136 aa	Known RBP	4.07	□□□□□ -1.76
ATG10	YLL042C	CDC26	P14724	124 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	AEP2	P22136	580 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	PET127	P32606	800 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	APT2	P36973	181 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	FMO1	P38866	432 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	IES1	P43579	692 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	YJL163C	P46996	555 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	SUN4	P53616	420 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	YMR210W	Q03649	449 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	ADY4	Q05955	493 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	STP4	Q07351	490 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	VHS3	Q08438	674 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	RMP1	Q12530	201 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	ECM3	Q99252	613 aa		4.07	□□□□□ -1.76
ATG10	YLL042C	ALG7	P07286	448 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	ATP12	P22135	325 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	HEM12	P32347	362 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG10	YLL042C	TFC4	P33339	1025 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	YKL222C	P35995	705 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	BCD1	P38772	366 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	CHS7	P38843	316 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	CCT3	P39077	534 aa	Known RBP	4.06	□□□□□ -1.76
ATG10	YLL042C	VID28	P40547	921 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	RSC8	P43609	557 aa	Known RBP	4.06	□□□□□ -1.76
ATG10	YLL042C	BFA1	P47113	574 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	COX18	P53239	316 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	SKY1	Q03656	742 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	CTK1	Q03957	528 aa	Known RBP	4.06	□□□□□ -1.76
ATG10	YLL042C	YOL073C	Q08232	322 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	SGO1	Q08490	590 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	YPR027C	Q12079	277 aa		4.06	□□□□□ -1.76
ATG10	YLL042C	SIR3	P06701	978 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	PPR1	P07272	904 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG10	YLL042C	FRS1	P15624	595 aa	Known RBP	4.05	□□□□□ -1.76
ATG10	YLL042C	PEX1	P24004	1043 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	SEC6	P32844	805 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	BIT2	P38346	545 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	SUL1	P38359	859 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
ATG10	YLL042C	NUP60	P39705	539 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	AIM21	P40563	679 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	UBC11	P52492	156 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	PEX14	P53112	341 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	PEX8	P53248	589 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	TGL2	P54857	326 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	RNT1	Q02555	471 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	THI22	Q06490	572 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	PUS9	Q12069	462 aa		4.05	□□□□□ -1.76
ATG10	YLL042C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
ATG10	YLL042C	HXT4	P32467	576 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	HIR1	P32479	840 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	PPS1	P38148	807 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	BUD8	P41698	603 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	BIT61	P47041	543 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	MSE1	P48525	536 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	YNL034W	P53963	612 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	YNL018C	P53976	612 aa		4.04	□□□□□ -1.76
ATG10	YLL042C	COX11	P19516	300 aa	Known RBP	4.03	□□□□□ -1.76
ATG10	YLL042C	MF(ALPHA)2	P32435	120 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms