RNA–Protein interactions for RNA: YKL198C

PTK1, Transcript of Putative serine/threonine protein kinase, yeast

Gene PTK1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTK1	YKL198C	CSG2	P35206	410 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	MRX3	P38172	270 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	PPX1	P38698	397 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	SMF2	P38778	549 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	FIS1	P40515	155 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	TAF1	P46677	1066 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	TAM41	P53230	385 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	RGA2	Q06407	1009 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	SLP1	Q12232	587 aa		11.78	□□□□□ -0.52
PTK1	YKL198C	KAR4	P25583	335 aa		11.77	□□□□□ -0.53
PTK1	YKL198C	BEM4	P39011	633 aa		11.77	□□□□□ -0.53
PTK1	YKL198C	PHO86	P46956	311 aa		11.77	□□□□□ -0.53
PTK1	YKL198C	CTR1	P49573	406 aa		11.77	□□□□□ -0.53
PTK1	YKL198C	INP52	P50942	1183 aa		11.77	□□□□□ -0.53
PTK1	YKL198C	YGL039W	P53183	348 aa	Known RBP	11.77	□□□□□ -0.53
PTK1	YKL198C	NOP15	P53927	220 aa	Predicted RBP	11.77	□□□□□ -0.53
PTK1	YKL198C	RSA3	Q05942	220 aa	Known RBP	11.77	□□□□□ -0.53
PTK1	YKL198C	YLR326W	Q06170	240 aa	Known RBP	11.77	□□□□□ -0.53
PTK1	YKL198C	PMA1	P05030	918 aa	Known RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	RPL5	P26321	297 aa	Known RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	GYP6	P32806	458 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	ECM4	P36156	370 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	LAM1	P38851	1228 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	CPR7	P47103	393 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	TBF1	Q02457	562 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	TRE1	Q08919	783 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	RUP1	Q12242	671 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	ADE3	P07245	946 aa	Known RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	TUB3	P09734	445 aa	Known RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	SSC1	P0CS90	654 aa	Known RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	CDC24	P11433	854 aa	Predicted RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	HEM3	P28789	327 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
PTK1	YKL198C	SCS2	P40075	244 aa	Known RBP	11.76	□□□□□ -0.53
PTK1	YKL198C	AIM21	P40563	679 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	MTC3	P53077	123 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	FMN1	Q03778	218 aa		11.76	□□□□□ -0.53
PTK1	YKL198C	RNR1	P21524	888 aa	Known RBP	11.75	□□□□□ -0.53
PTK1	YKL198C	DRN1	P53255	507 aa	Known RBP	11.75	□□□□□ -0.53
PTK1	YKL198C	KTR5	P53966	522 aa	Predicted RBP	11.75	□□□□□ -0.53
PTK1	YKL198C	DAK1	P54838	584 aa	Known RBP	11.75	□□□□□ -0.53
PTK1	YKL198C	ARO80	Q04052	950 aa		11.75	□□□□□ -0.53
PTK1	YKL198C	PHM6	Q05637	104 aa		11.75	□□□□□ -0.53
PTK1	YKL198C	PGK1	P00560	416 aa	Known RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	BI2	P03873	423 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	BI4	P03879	638 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	ILS1	P09436	1072 aa	Known RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	ICL1	P28240	557 aa	Predicted RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	AST1	P35183	429 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	YHL008C	P38750	627 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	PMC1	P38929	1173 aa	Predicted RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	RGD2	P43556	714 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	HSH155	P49955	971 aa	Known RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	LIF1	P53150	421 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	BIO4	P53630	237 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	RPM2	Q02773	1202 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	YMR074C	Q04773	145 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	CRD1	Q07560	283 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	YDR018C	Q12185	396 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	BI3	Q9ZZW7	517 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	TCP1	P12612	559 aa	Known RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	TMN3	P40071	706 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	ALY2	P47029	1046 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	BUD22	Q04347	519 aa	Known RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	IVY1	Q04934	453 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	CDC73	Q06697	393 aa		11.74	□□□□□ -0.53
PTK1	YKL198C	YOR059C	Q08448	450 aa	Known RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	FAP7	Q12055	197 aa	Predicted RBP	11.74	□□□□□ -0.53
PTK1	YKL198C	YAK1	P14680	807 aa		11.73	□□□□□ -0.53
PTK1	YKL198C	EXO70	P19658	623 aa		11.73	□□□□□ -0.53
PTK1	YKL198C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.73	□□□□□ -0.53	not detected
PTK1	YKL198C	HES1	P35843	434 aa		11.73	□□□□□ -0.53
PTK1	YKL198C	PCA1	P38360	1216 aa		11.73	□□□□□ -0.53
PTK1	YKL198C	PRK1	P40494	810 aa		11.73	□□□□□ -0.53
PTK1	YKL198C	PAN2	P53010	1115 aa	Predicted RBP	11.73	□□□□□ -0.53
PTK1	YKL198C	STE20	Q03497	939 aa	Known RBP	11.73	□□□□□ -0.53
PTK1	YKL198C	TAL1	P15019	335 aa	Known RBP	11.72	□□□□□ -0.53
PTK1	YKL198C	SEG2	P34250	1132 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	ATG19	P35193	415 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	MSR1	P38714	643 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	TRM5	P38793	499 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	SAE2	P46946	345 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	AVT1	P47082	602 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	IST1	P53843	298 aa	Predicted RBP	11.72	□□□□□ -0.53
PTK1	YKL198C	PRM6	Q04705	352 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	ADE13	Q05911	482 aa	Known RBP	11.72	□□□□□ -0.53
PTK1	YKL198C	CDC42	P19073	191 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	RRT12	P25381	491 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	YSC84	P32793	468 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	SEC6	P32844	805 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	PHO88	P38264	188 aa	Predicted RBP	11.72	□□□□□ -0.53
PTK1	YKL198C	DPH1	P40487	425 aa	Known RBP	11.72	□□□□□ -0.53
PTK1	YKL198C	YJL107C	P42947	387 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	FMP33	P46998	180 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	YGR016W	P53209	190 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	SOL4	P53315	255 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	TEP1	P53916	434 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	YET3	Q07451	203 aa		11.72	□□□□□ -0.53
PTK1	YKL198C	ABD1	P32783	436 aa	Predicted RBP	11.71	□□□□□ -0.53
PTK1	YKL198C	ETR1	P38071	380 aa		11.71	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms