RNA–Protein interactions for RNA: YKL164C

PIR1, Transcript of O-glycosylated protein required for cell wall stability, yeast

Gene PIR1, Length 1,026 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIR1	YKL164C	SEC21	P32074	935 aa	Known RBP	4.14	□□□□□ -1.75
PIR1	YKL164C	THI80	P35202	319 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	YHR078W	P38799	552 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	PLB1	P39105	664 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	SSB2	P40150	613 aa	Known RBP	4.14	□□□□□ -1.75
PIR1	YKL164C	SSY5	P47002	699 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	BNA2	P47125	453 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	RIM8	P53179	542 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	RIA1	P53893	1110 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	NOP12	Q08208	459 aa	Known RBP	4.14	□□□□□ -1.75
PIR1	YKL164C	PSK1	P31374	1356 aa		4.14	□□□□□ -1.75
PIR1	YKL164C	YLR419W	Q06698	1435 aa	Known RBP	4.13	□□□□□ -1.75
PIR1	YKL164C	PRP6	P19735	899 aa	Predicted RBP	4.13	□□□□□ -1.75
PIR1	YKL164C	SED4	P25365	1065 aa		4.13	□□□□□ -1.75
PIR1	YKL164C	HSL7	P38274	827 aa		4.13	□□□□□ -1.75
PIR1	YKL164C	MSS4	P38994	779 aa		4.13	□□□□□ -1.75
PIR1	YKL164C	NIT1	P40447	199 aa		4.13	□□□□□ -1.75
PIR1	YKL164C	NPC2	Q12408	173 aa		4.13	□□□□□ -1.75
PIR1	YKL164C	TOD6	P34219	525 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	LST4	P34239	828 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	FLR1	P38124	548 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	CKB2	P38930	258 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	SAK1	P38990	1142 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	NPY1	P53164	384 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	ASI2	P53895	289 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	ARP4	P80428	489 aa		4.12	□□□□□ -1.75
PIR1	YKL164C	MUS81	Q04149	632 aa	Predicted RBP	4.12	□□□□□ -1.75
PIR1	YKL164C	ADE6	P38972	1358 aa	Known RBP	4.12	□□□□□ -1.75
PIR1	YKL164C	RPP2A	P05319	106 aa	Known RBP	4.11	□□□□□ -1.75
PIR1	YKL164C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
PIR1	YKL164C	PRP19	P32523	503 aa	Known RBP	4.11	□□□□□ -1.75
PIR1	YKL164C	ELM1	P32801	640 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	YKR018C	P36114	725 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	PFA3	P42836	336 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	YFL052W	P43551	465 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	AVT1	P47082	602 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	PRP43	P53131	767 aa	Known RBP	4.11	□□□□□ -1.75
PIR1	YKL164C	RPN7	Q06103	429 aa	Known RBP	4.11	□□□□□ -1.75
PIR1	YKL164C	FAP7	Q12055	197 aa	Predicted RBP	4.11	□□□□□ -1.75
PIR1	YKL164C	LAS17	Q12446	633 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	TMA17	Q12513	150 aa		4.11	□□□□□ -1.75
PIR1	YKL164C	SPE2	P21182	396 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	KAR4	P25583	335 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	MNN4	P36044	1178 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	TAF5	P38129	798 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	DOT6	P40059	670 aa	Known RBP	4.1	□□□□□ -1.75
PIR1	YKL164C	VHR1	P40522	640 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	YJR120W	P47157	116 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	EXG2	P52911	562 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	LEE1	Q02799	301 aa	Known RBP	4.1	□□□□□ -1.75
PIR1	YKL164C	HFD1	Q04458	532 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	TMA10	Q06177	86 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	DCS2	Q12123	353 aa		4.1	□□□□□ -1.75
PIR1	YKL164C	EUG1	P32474	517 aa		4.09	□□□□□ -1.75
PIR1	YKL164C	TOM20	P35180	183 aa		4.09	□□□□□ -1.75
PIR1	YKL164C	MIP6	P38760	659 aa	Known RBP	4.09	□□□□□ -1.75
PIR1	YKL164C	OAF1	P39720	1047 aa	Predicted RBP	4.09	□□□□□ -1.75
PIR1	YKL164C	CCT5	P40413	562 aa	Known RBP	4.09	□□□□□ -1.75
PIR1	YKL164C	PCL10	P53124	433 aa		4.09	□□□□□ -1.75
PIR1	YKL164C	MRPS35	P53292	345 aa		4.09	□□□□□ -1.75
PIR1	YKL164C	BRE5	P53741	515 aa	Known RBP	4.09	□□□□□ -1.75
PIR1	YKL164C	ERG5	P54781	538 aa		4.09	□□□□□ -1.75
PIR1	YKL164C	ECM9	Q02202	377 aa		4.09	□□□□□ -1.75
PIR1	YKL164C	FKS3	Q04952	1785 aa		4.09	□□□□□ -1.76
PIR1	YKL164C	ENP1	P38333	483 aa	Known RBP	4.08	□□□□□ -1.76
PIR1	YKL164C	HXT6	P39003	570 aa	Known RBP	4.08	□□□□□ -1.76
PIR1	YKL164C	HXT7	P39004	570 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	PZF1	P39933	429 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	GZF3	P42944	551 aa	Known RBP	4.08	□□□□□ -1.76
PIR1	YKL164C	RET2	P43621	546 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	MHP1	P43638	1398 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	MTR3	P48240	250 aa	Predicted RBP	4.08	□□□□□ -1.76
PIR1	YKL164C	FOL1	P53848	824 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	PEX19	Q07418	342 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	YTM1	Q12024	460 aa	Predicted RBP	4.08	□□□□□ -1.76
PIR1	YKL164C	SWM1	Q12379	170 aa		4.08	□□□□□ -1.76
PIR1	YKL164C	YIL177C	P40434	1758 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	YJL225C	P40889	1758 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	YLR415C	O13578	112 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	MRC1	P25588	1096 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	DAL3	P32459	195 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	SIC1	P38634	284 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	YJR039W	P47107	1121 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	YGR153W	P48238	217 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PIR1	YKL164C	COG6	P53959	839 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	RPS21B	Q3E754	87 aa	Known RBP	4.07	□□□□□ -1.76
PIR1	YKL164C	YRF1-3	P0CX14	1859 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	YRF1-7	P0CX15	1859 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	YRF1-6	P53819	1859 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	URB1	P34241	1764 aa	Known RBP	4.07	□□□□□ -1.76
PIR1	YKL164C	APC1	P53886	1748 aa		4.07	□□□□□ -1.76
PIR1	YKL164C	EDE1	P34216	1381 aa		4.06	□□□□□ -1.76
PIR1	YKL164C	RPS21A	P0C0V8	87 aa	Known RBP	4.06	□□□□□ -1.76
PIR1	YKL164C	STE11	P23561	717 aa		4.06	□□□□□ -1.76
PIR1	YKL164C	CTF13	P35203	478 aa		4.06	□□□□□ -1.76
PIR1	YKL164C	YBR071W	P38243	211 aa		4.06	□□□□□ -1.76
PIR1	YKL164C	TDA3	P38758	523 aa		4.06	□□□□□ -1.76
PIR1	YKL164C	SSZ1	P38788	538 aa	Known RBP	4.06	□□□□□ -1.76
PIR1	YKL164C	GID8	P40208	455 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms