RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCA1	YER168C	AIM21	P40563	679 aa		11.14	□□□□□ -0.63
CCA1	YER168C	TMA22	P47089	198 aa	Predicted RBP	11.14	□□□□□ -0.63
CCA1	YER168C	RSM26	P47141	266 aa		11.14	□□□□□ -0.63
CCA1	YER168C	INP52	P50942	1183 aa		11.14	□□□□□ -0.63
CCA1	YER168C	YMR321C	Q04898	105 aa		11.14	□□□□□ -0.63
CCA1	YER168C	TDA5	Q06417	326 aa	Known RBP	11.14	□□□□□ -0.63
CCA1	YER168C	RRD2	Q12461	358 aa		11.14	□□□□□ -0.63
CCA1	YER168C	ARD1	P07347	238 aa	Predicted RBP	11.13	□□□□□ -0.63
CCA1	YER168C	PRP4	P20053	465 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	BAS1	P22035	811 aa		11.13	□□□□□ -0.63
CCA1	YER168C	EFT1	P32324	842 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	IRE1	P32361	1115 aa		11.13	□□□□□ -0.63
CCA1	YER168C	TRM2	P33753	639 aa		11.13	□□□□□ -0.63
CCA1	YER168C	DUG2	P38149	878 aa		11.13	□□□□□ -0.63
CCA1	YER168C	YBR032W	P38223	100 aa		11.13	□□□□□ -0.63
CCA1	YER168C	CBR1	P38626	284 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	APM2	P38700	605 aa		11.13	□□□□□ -0.63
CCA1	YER168C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.13	□□□□□ -0.63	not detected
CCA1	YER168C	ZAP1	P47043	880 aa		11.13	□□□□□ -0.63
CCA1	YER168C	TRS130	Q03660	1102 aa		11.13	□□□□□ -0.63
CCA1	YER168C	YMR027W	Q04371	470 aa		11.13	□□□□□ -0.63
CCA1	YER168C	YLR177W	Q06251	628 aa		11.13	□□□□□ -0.63
CCA1	YER168C	MAG2	Q06436	670 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	CMD1	P06787	147 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	PAM1	P37304	830 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	VID24	P38263	362 aa		11.13	□□□□□ -0.63
CCA1	YER168C	PEA2	P40091	420 aa		11.13	□□□□□ -0.63
CCA1	YER168C	ALA1	P40825	983 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	RPS7B	P48164	190 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	YOR059C	Q08448	450 aa	Known RBP	11.13	□□□□□ -0.63
CCA1	YER168C	YER152C	P10356	443 aa		11.12	□□□□□ -0.63
CCA1	YER168C	MGT1	P26188	188 aa		11.12	□□□□□ -0.63
CCA1	YER168C	DPH2	P32461	534 aa		11.12	□□□□□ -0.63
CCA1	YER168C	MKT1	P40850	830 aa	Known RBP	11.12	□□□□□ -0.63
CCA1	YER168C	MDR1	P53258	950 aa		11.12	□□□□□ -0.63
CCA1	YER168C	YPL109C	Q02981	657 aa		11.12	□□□□□ -0.63
CCA1	YER168C	VPS72	Q03388	795 aa		11.12	□□□□□ -0.63
CCA1	YER168C	YDR018C	Q12185	396 aa		11.12	□□□□□ -0.63
CCA1	YER168C	MRPL25	P23369	157 aa		11.11	□□□□□ -0.63
CCA1	YER168C	COG6	P53959	839 aa		11.11	□□□□□ -0.63
CCA1	YER168C	SHE9	Q04172	456 aa		11.11	□□□□□ -0.63
CCA1	YER168C	SPC24	Q04477	213 aa		11.11	□□□□□ -0.63
CCA1	YER168C	ECM7	Q06200	448 aa		11.11	□□□□□ -0.63
CCA1	YER168C	SHS1	Q07657	551 aa		11.11	□□□□□ -0.63
CCA1	YER168C	YDR461C-A	Q2V2P7	80 aa		11.11	□□□□□ -0.63
CCA1	YER168C	IXR1	P33417	597 aa		11.1	□□□□□ -0.63
CCA1	YER168C	RGD2	P43556	714 aa		11.1	□□□□□ -0.63
CCA1	YER168C	NET1	P47035	1189 aa		11.1	□□□□□ -0.63
CCA1	YER168C	TPO2	P53283	614 aa		11.1	□□□□□ -0.63
CCA1	YER168C	YAF9	P53930	226 aa		11.1	□□□□□ -0.63
CCA1	YER168C	YNL040W	P53960	456 aa	Predicted RBP	11.1	□□□□□ -0.63
CCA1	YER168C	CWC15	Q03772	175 aa	Known RBP	11.1	□□□□□ -0.63
CCA1	YER168C	PDR1	P12383	1068 aa		11.09	□□□□□ -0.63
CCA1	YER168C	PKC1	P24583	1151 aa		11.09	□□□□□ -0.63
CCA1	YER168C	SWE1	P32944	819 aa		11.09	□□□□□ -0.63
CCA1	YER168C	YBP1	P38315	674 aa		11.09	□□□□□ -0.63
CCA1	YER168C	SPC97	P38863	823 aa		11.09	□□□□□ -0.63
CCA1	YER168C	KHA1	P40309	873 aa		11.09	□□□□□ -0.63
CCA1	YER168C	ARG2	P40360	574 aa		11.09	□□□□□ -0.63
CCA1	YER168C	EMW1	P42842	904 aa	Known RBP	11.09	□□□□□ -0.63
CCA1	YER168C	YJL045W	P47052	634 aa		11.09	□□□□□ -0.63
CCA1	YER168C	MNP1	P53163	194 aa	Predicted RBP	11.09	□□□□□ -0.63
CCA1	YER168C	GTR1	Q00582	310 aa		11.09	□□□□□ -0.63
CCA1	YER168C	PRM6	Q04705	352 aa		11.09	□□□□□ -0.63
CCA1	YER168C	CFT2	Q12102	859 aa	Predicted RBP	11.09	□□□□□ -0.63
CCA1	YER168C	TRX1	P22217	103 aa	Known RBP	11.09	□□□□□ -0.63
CCA1	YER168C	MVD1	P32377	396 aa	Known RBP	11.09	□□□□□ -0.63
CCA1	YER168C	MMS4	P38257	691 aa		11.09	□□□□□ -0.63
CCA1	YER168C	TMA108	P40462	946 aa		11.09	□□□□□ -0.63
CCA1	YER168C	KAP95	Q06142	861 aa	Known RBP	11.09	□□□□□ -0.63
CCA1	YER168C	CDC73	Q06697	393 aa		11.09	□□□□□ -0.63
CCA1	YER168C	YLL058W	Q12198	575 aa		11.09	□□□□□ -0.63
CCA1	YER168C	ZPS1	Q12512	249 aa		11.09	□□□□□ -0.63
CCA1	YER168C	RPL4A	P10664	362 aa	Known RBP	11.08	□□□□□ -0.64
CCA1	YER168C	CDC24	P11433	854 aa	Predicted RBP	11.08	□□□□□ -0.64
CCA1	YER168C	KAR4	P25583	335 aa		11.08	□□□□□ -0.64
CCA1	YER168C	OXP1	P28273	1286 aa		11.08	□□□□□ -0.64
CCA1	YER168C	KIP2	P28743	706 aa		11.08	□□□□□ -0.64
CCA1	YER168C	RAD5	P32849	1169 aa	Predicted RBP	11.08	□□□□□ -0.64
CCA1	YER168C	SET3	P36124	751 aa		11.08	□□□□□ -0.64
CCA1	YER168C	QNS1	P38795	714 aa	Known RBP	11.08	□□□□□ -0.64
CCA1	YER168C	SAH1	P39954	449 aa	Known RBP	11.08	□□□□□ -0.64
CCA1	YER168C	SNZ3	P43545	298 aa		11.08	□□□□□ -0.64
CCA1	YER168C	ALY2	P47029	1046 aa		11.08	□□□□□ -0.64
CCA1	YER168C	ACF4	P47129	309 aa		11.08	□□□□□ -0.64
CCA1	YER168C	RPL4B	P49626	362 aa	Known RBP	11.08	□□□□□ -0.64
CCA1	YER168C	HOP2	P53187	214 aa		11.08	□□□□□ -0.64
CCA1	YER168C	SNZ2	P53824	298 aa		11.08	□□□□□ -0.64
CCA1	YER168C	GPD1	Q00055	391 aa	Known RBP	11.08	□□□□□ -0.64
CCA1	YER168C	FAP7	Q12055	197 aa	Predicted RBP	11.08	□□□□□ -0.64
CCA1	YER168C	YMR085W	P0CF18	432 aa		11.07	□□□□□ -0.64
CCA1	YER168C	ASP3-2	P0CX77	362 aa		11.07	□□□□□ -0.64
CCA1	YER168C	ASP3-3	P0CX78	362 aa		11.07	□□□□□ -0.64
CCA1	YER168C	ASP3-4	P0CX79	362 aa		11.07	□□□□□ -0.64
CCA1	YER168C	ASP3-1	P0CZ17	362 aa		11.07	□□□□□ -0.64
CCA1	YER168C	PCM1	P38628	557 aa	Known RBP	11.07	□□□□□ -0.64
CCA1	YER168C	TFG1	P41895	735 aa	Predicted RBP	11.07	□□□□□ -0.64
CCA1	YER168C	PSP2	P50109	593 aa	Known RBP	11.07	□□□□□ -0.64
CCA1	YER168C	TFB2	Q02939	513 aa		11.07	□□□□□ -0.64
CCA1	YER168C	THI7	Q05998	598 aa		11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms