RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	MNN4	P36044	1178 aa		2.71	□□□□□ -1.98
DOT6	YER088C	PCL10	P53124	433 aa		2.71	□□□□□ -1.98
DOT6	YER088C	BRE5	P53741	515 aa	Known RBP	2.71	□□□□□ -1.98
DOT6	YER088C	HMO1	Q03973	246 aa	Known RBP	2.71	□□□□□ -1.98
DOT6	YER088C	RPN7	Q06103	429 aa	Known RBP	2.71	□□□□□ -1.98
DOT6	YER088C	TUB2	P02557	457 aa	Known RBP	2.7	□□□□□ -1.98
DOT6	YER088C	ERG4	P25340	473 aa		2.7	□□□□□ -1.98
DOT6	YER088C	SSZ1	P38788	538 aa	Known RBP	2.7	□□□□□ -1.98
DOT6	YER088C	ECM1	P39715	212 aa		2.7	□□□□□ -1.98
DOT6	YER088C	HOS4	P40480	1083 aa		2.7	□□□□□ -1.98
DOT6	YER088C	FKH2	P41813	862 aa		2.7	□□□□□ -1.98
DOT6	YER088C	BAP3	P41815	604 aa		2.7	□□□□□ -1.98
DOT6	YER088C	MTR3	P48240	250 aa	Predicted RBP	2.7	□□□□□ -1.98
DOT6	YER088C	MSE1	P48525	536 aa		2.7	□□□□□ -1.98
DOT6	YER088C	AIM44	Q99299	758 aa		2.7	□□□□□ -1.98
DOT6	YER088C	KTR4	P38131	464 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YBR259W	P38338	688 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YHR112C	P38716	378 aa		2.69	□□□□□ -1.98
DOT6	YER088C	ELO3	P40319	345 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YFL052W	P43551	465 aa		2.69	□□□□□ -1.98
DOT6	YER088C	SDA1	P53313	767 aa	Known RBP	2.69	□□□□□ -1.98
DOT6	YER088C	TEX1	P53851	422 aa	Known RBP	2.69	□□□□□ -1.98
DOT6	YER088C	ARG5,6	Q01217	863 aa		2.69	□□□□□ -1.98
DOT6	YER088C	RGC1	Q06108	1083 aa	Known RBP	2.69	□□□□□ -1.98
DOT6	YER088C	THI73	Q07904	523 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YGR161W-C	Q3E744	92 aa		2.69	□□□□□ -1.98
DOT6	YER088C	LAT1	P12695	482 aa	Known RBP	2.69	□□□□□ -1.98
DOT6	YER088C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
DOT6	YER088C	ERG6	P25087	383 aa	Known RBP	2.69	□□□□□ -1.98
DOT6	YER088C	SFP1	P32432	683 aa		2.69	□□□□□ -1.98
DOT6	YER088C	APL2	P36000	726 aa	Predicted RBP	2.69	□□□□□ -1.98
DOT6	YER088C	AIM21	P40563	679 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YJR039W	P47107	1121 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YJR096W	P47137	282 aa		2.69	□□□□□ -1.98
DOT6	YER088C	PRP31	P49704	494 aa	Predicted RBP	2.69	□□□□□ -1.98
DOT6	YER088C	MUP1	P50276	574 aa		2.69	□□□□□ -1.98
DOT6	YER088C	NRG1	Q03125	231 aa		2.69	□□□□□ -1.98
DOT6	YER088C	DLT1	Q04216	342 aa		2.69	□□□□□ -1.98
DOT6	YER088C	AIM39	Q08223	395 aa		2.69	□□□□□ -1.98
DOT6	YER088C	YOL073C	Q08232	322 aa		2.69	□□□□□ -1.98
DOT6	YER088C	SPO14	P36126	1683 aa		2.68	□□□□□ -1.98
DOT6	YER088C	NGG1	P32494	702 aa		2.68	□□□□□ -1.98
DOT6	YER088C	YPT7	P32939	208 aa		2.68	□□□□□ -1.98
DOT6	YER088C	AKL1	P38080	1108 aa	Known RBP	2.68	□□□□□ -1.98
DOT6	YER088C	CRP1	P38845	465 aa	Known RBP	2.68	□□□□□ -1.98
DOT6	YER088C	LYS9	P38999	446 aa		2.68	□□□□□ -1.98
DOT6	YER088C	UBP12	P39538	1254 aa		2.68	□□□□□ -1.98
DOT6	YER088C	AMA1	P50082	593 aa		2.68	□□□□□ -1.98
DOT6	YER088C	MTQ2	Q03920	221 aa	Predicted RBP	2.68	□□□□□ -1.98
DOT6	YER088C	GSF2	Q04697	403 aa	Known RBP	2.68	□□□□□ -1.98
DOT6	YER088C	ADY4	Q05955	493 aa		2.68	□□□□□ -1.98
DOT6	YER088C	GUD1	Q07729	489 aa		2.68	□□□□□ -1.98
DOT6	YER088C	FRE5	Q08908	694 aa		2.68	□□□□□ -1.98
DOT6	YER088C	HRP1	Q99383	534 aa	Known RBP	2.68	□□□□□ -1.98
DOT6	YER088C	NUP170	P38181	1502 aa		2.68	□□□□□ -1.98
DOT6	YER088C	PPR1	P07272	904 aa	Predicted RBP	2.68	□□□□□ -1.98
DOT6	YER088C	ALG7	P07286	448 aa		2.68	□□□□□ -1.98
DOT6	YER088C	GRX4	P32642	244 aa		2.68	□□□□□ -1.98
DOT6	YER088C	CKB2	P38930	258 aa		2.68	□□□□□ -1.98
DOT6	YER088C	CCT5	P40413	562 aa	Known RBP	2.68	□□□□□ -1.98
DOT6	YER088C	GPP1	P41277	250 aa	Known RBP	2.68	□□□□□ -1.98
DOT6	YER088C	YJL163C	P46996	555 aa		2.68	□□□□□ -1.98
DOT6	YER088C	RNT1	Q02555	471 aa		2.68	□□□□□ -1.98
DOT6	YER088C	MCM21	Q06675	368 aa		2.68	□□□□□ -1.98
DOT6	YER088C	ATG11	Q12527	1178 aa		2.68	□□□□□ -1.98
DOT6	YER088C	SNT2	P53127	1403 aa		2.67	□□□□□ -1.98
DOT6	YER088C	SMC4	Q12267	1418 aa		2.67	□□□□□ -1.98
DOT6	YER088C	CAF20	P12962	161 aa	Known RBP	2.67	□□□□□ -1.98
DOT6	YER088C	TYS1	P36421	394 aa	Known RBP	2.67	□□□□□ -1.98
DOT6	YER088C	SUL1	P38359	859 aa		2.67	□□□□□ -1.98
DOT6	YER088C	HXT6	P39003	570 aa	Known RBP	2.67	□□□□□ -1.98
DOT6	YER088C	HXT7	P39004	570 aa		2.67	□□□□□ -1.98
DOT6	YER088C	BEM4	P39011	633 aa		2.67	□□□□□ -1.98
DOT6	YER088C	NUG1	P40010	520 aa	Known RBP	2.67	□□□□□ -1.98
DOT6	YER088C	GET2	P40056	285 aa		2.67	□□□□□ -1.98
DOT6	YER088C	DOT6	P40059	670 aa	Known RBP	2.67	□□□□□ -1.98
DOT6	YER088C	YIR042C	P40586	236 aa		2.67	□□□□□ -1.98
DOT6	YER088C	HLJ1	P48353	224 aa		2.67	□□□□□ -1.98
DOT6	YER088C	UME1	Q03010	460 aa		2.67	□□□□□ -1.98
DOT6	YER088C	SPP41	P38904	1435 aa		2.66	□□□□□ -1.98
DOT6	YER088C	MET3	P08536	511 aa		2.66	□□□□□ -1.98
DOT6	YER088C	RET2	P43621	546 aa		2.66	□□□□□ -1.98
DOT6	YER088C	SET2	P46995	733 aa	Known RBP	2.66	□□□□□ -1.98
DOT6	YER088C	PMT3	P47190	753 aa		2.66	□□□□□ -1.98
DOT6	YER088C	UBC11	P52492	156 aa		2.66	□□□□□ -1.98
DOT6	YER088C	MTL1	P53214	551 aa		2.66	□□□□□ -1.98
DOT6	YER088C	ORC4	P54791	529 aa		2.66	□□□□□ -1.98
DOT6	YER088C	CTF4	Q01454	927 aa		2.66	□□□□□ -1.98
DOT6	YER088C	ECM9	Q02202	377 aa		2.66	□□□□□ -1.98
DOT6	YER088C	IRC13	Q08630	104 aa		2.66	□□□□□ -1.98
DOT6	YER088C	POL1	P13382	1468 aa		2.66	□□□□□ -1.98
DOT6	YER088C	DOP1	Q03921	1698 aa		2.66	□□□□□ -1.98
DOT6	YER088C	SIR3	P06701	978 aa		2.66	□□□□□ -1.98
DOT6	YER088C	RNR1	P21524	888 aa	Known RBP	2.66	□□□□□ -1.98
DOT6	YER088C	HIR1	P32479	840 aa		2.66	□□□□□ -1.98
DOT6	YER088C	SEC6	P32844	805 aa		2.66	□□□□□ -1.98
DOT6	YER088C	PPS1	P38148	807 aa		2.66	□□□□□ -1.98
DOT6	YER088C	BCD1	P38772	366 aa		2.66	□□□□□ -1.98
DOT6	YER088C	FMO1	P38866	432 aa		2.66	□□□□□ -1.98
DOT6	YER088C	YGL081W	P53156	320 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 1610.9 ms