RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C NOC2P39744 710 aaKnown RBP1.54□□□□□ -2.16
SEC3YER008C HIS6P40545 261 aa1.54□□□□□ -2.16
SEC3YER008C RSC1P53236 928 aa1.54□□□□□ -2.16
SEC3YER008C ENV11P53246 860 aa1.54□□□□□ -2.16
SEC3YER008C PKH1Q03407 766 aa1.54□□□□□ -2.16
SEC3YER008C YDR338CQ05497 695 aa1.54□□□□□ -2.16
SEC3YER008C DRS2P39524 1355 aa1.54□□□□□ -2.16
SEC3YER008C FOB1O13329 566 aa1.54□□□□□ -2.16
SEC3YER008C SFL1P20134 766 aa1.54□□□□□ -2.16
SEC3YER008C PCL2P25693 308 aa1.54□□□□□ -2.16
SEC3YER008C PUB1P32588 453 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SEC3YER008C SLA2P33338 968 aa1.54□□□□□ -2.16
SEC3YER008C PAF1P38351 445 aa1.54□□□□□ -2.16
SEC3YER008C GYP8P43570 497 aa1.54□□□□□ -2.16
SEC3YER008C MRPL22P53881 309 aa1.54□□□□□ -2.16
SEC3YER008C NAT1P12945 854 aaKnown RBP1.53□□□□□ -2.16
SEC3YER008C NPP1P25353 742 aa1.53□□□□□ -2.16
SEC3YER008C MCM10P32354 571 aa1.53□□□□□ -2.16
SEC3YER008C CDC12P32468 407 aaKnown RBP1.53□□□□□ -2.16
SEC3YER008C MTC2P34246 357 aa1.53□□□□□ -2.16
SEC3YER008C YHL041WP38730 149 aa1.53□□□□□ -2.16
SEC3YER008C LAM1P38851 1228 aa1.53□□□□□ -2.16
SEC3YER008C GPP2P40106 250 aaKnown RBP1.53□□□□□ -2.16
SEC3YER008C SSY5P47002 699 aa1.53□□□□□ -2.16
SEC3YER008C GYP7P48365 746 aa1.53□□□□□ -2.16
SEC3YER008C YHM2Q04013 314 aa1.53□□□□□ -2.16
SEC3YER008C Q0142Q9ZZW4 58 aa1.53□□□□□ -2.16
SEC3YER008C UTP10P42945 1769 aaKnown RBP1.53□□□□□ -2.16
SEC3YER008C INH1P01097 85 aa1.53□□□□□ -2.16
SEC3YER008C RPS9BP05755 195 aaKnown RBP1.53□□□□□ -2.16
SEC3YER008C HCA4P20448 770 aaKnown RBP1.53□□□□□ -2.16
SEC3YER008C MRC1P25588 1096 aa1.53□□□□□ -2.16
SEC3YER008C SEG2P34250 1132 aa1.53□□□□□ -2.16
SEC3YER008C IRC3Q06683 689 aa1.53□□□□□ -2.16
SEC3YER008C SSP2Q08646 371 aa1.53□□□□□ -2.16
SEC3YER008C SRD1P09007 221 aa1.53□□□□□ -2.17
SEC3YER008C SNF5P18480 905 aa1.53□□□□□ -2.17
SEC3YER008C ATP12P22135 325 aa1.53□□□□□ -2.17
SEC3YER008C AFR1P33304 620 aa1.53□□□□□ -2.17
SEC3YER008C MUD2P36084 527 aaKnown RBP1.53□□□□□ -2.17
SEC3YER008C NAB3P38996 802 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17not detected
SEC3YER008C MNT3P40549 630 aa1.53□□□□□ -2.17
SEC3YER008C FKH2P41813 862 aa1.53□□□□□ -2.17
SEC3YER008C ECL1P48235 211 aa1.53□□□□□ -2.17
SEC3YER008C YML131WQ03102 365 aa1.53□□□□□ -2.17
SEC3YER008C RPN7Q06103 429 aaKnown RBP1.53□□□□□ -2.17
SEC3YER008C WHI4Q07655 649 aaKnown RBP1.53□□□□□ -2.17
SEC3YER008C SPE1P08432 466 aa1.52□□□□□ -2.17
SEC3YER008C SAM35P14693 329 aa1.52□□□□□ -2.17
SEC3YER008C ACE2P21192 770 aa1.52□□□□□ -2.17
SEC3YER008C CBR1P38626 284 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C GIC1P38785 314 aa1.52□□□□□ -2.17
SEC3YER008C RLP7P40693 322 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C UTP14Q04500 899 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C AIM39Q08223 395 aa1.52□□□□□ -2.17
SEC3YER008C RPS21BQ3E754 87 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C HMG1P12683 1054 aa1.52□□□□□ -2.17
SEC3YER008C SAN1P22470 610 aa1.52□□□□□ -2.17
SEC3YER008C MIH1P23748 554 aa1.52□□□□□ -2.17
SEC3YER008C YCL002CP25565 263 aa1.52□□□□□ -2.17
SEC3YER008C EMC3P36039 253 aa1.52□□□□□ -2.17
SEC3YER008C OAF1P39720 1047 aaPredicted RBP1.52□□□□□ -2.17
SEC3YER008C YGR153WP48238 217 aa1.52□□□□□ -2.17
SEC3YER008C TAN1P53072 289 aaPredicted RBP1.52□□□□□ -2.17
SEC3YER008C UBX4P54730 416 aa1.52□□□□□ -2.17
SEC3YER008C NRG1Q03125 231 aa1.52□□□□□ -2.17
SEC3YER008C YMR206WQ03695 313 aa1.52□□□□□ -2.17
SEC3YER008C LRS4Q04087 347 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C SSL1Q04673 461 aaPredicted RBP1.52□□□□□ -2.17
SEC3YER008C CIA1Q05583 330 aa1.52□□□□□ -2.17
SEC3YER008C RPS13P05756 151 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C MET3P08536 511 aa1.52□□□□□ -2.17
SEC3YER008C OPI1P21957 404 aa1.52□□□□□ -2.17
SEC3YER008C NIC96P34077 839 aa1.52□□□□□ -2.17
SEC3YER008C DUN1P39009 513 aa1.52□□□□□ -2.17
SEC3YER008C PES4P39684 611 aa1.52□□□□□ -2.17
SEC3YER008C VPS27P40343 622 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C RRT14P40470 206 aa1.52□□□□□ -2.17
SEC3YER008C RSC8P43609 557 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C MEP3P53390 489 aa1.52□□□□□ -2.17
SEC3YER008C DUS1P53759 423 aaKnown RBP1.52□□□□□ -2.17
SEC3YER008C YAP6Q03935 383 aa1.52□□□□□ -2.17
SEC3YER008C PEX19Q07418 342 aa1.52□□□□□ -2.17
SEC3YER008C ACK1Q07622 623 aaPredicted RBP1.52□□□□□ -2.17
SEC3YER008C RNQ1P25367 405 aa1.51□□□□□ -2.17
SEC3YER008C FAT1P38225 669 aa1.51□□□□□ -2.17
SEC3YER008C YHR078WP38799 552 aa1.51□□□□□ -2.17
SEC3YER008C EAF5P39995 279 aa1.51□□□□□ -2.17
SEC3YER008C TIM10P87108 93 aa1.51□□□□□ -2.17
SEC3YER008C GPD1Q00055 391 aaKnown RBP1.51□□□□□ -2.17
SEC3YER008C CEG1Q01159 459 aaPredicted RBP1.51□□□□□ -2.17
SEC3YER008C YKR011CQ02209 353 aa1.51□□□□□ -2.17
SEC3YER008C UGO1Q03327 502 aa1.51□□□□□ -2.17
SEC3YER008C HIF1Q12373 385 aa1.51□□□□□ -2.17
SEC3YER008C MSS18P08593 268 aa1.51□□□□□ -2.17
SEC3YER008C GFD2P25370 566 aaKnown RBP1.51□□□□□ -2.17
SEC3YER008C RPC82P32349 654 aa1.51□□□□□ -2.17
SEC3YER008C LRG1P35688 1017 aa1.51□□□□□ -2.17
SEC3YER008C NPP2P39997 493 aa1.51□□□□□ -2.17
SEC3YER008C PMT3P47190 753 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms