RNA–Protein interactions for RNA: YDR398W

UTP5, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP5, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP5	YDR398W	AKL1	P38080	1108 aa	Known RBP	4.68	□□□□□ -1.66
UTP5	YDR398W	MAL31	P38156	614 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	CRP1	P38845	465 aa	Known RBP	4.68	□□□□□ -1.66
UTP5	YDR398W	GET2	P40056	285 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	RET2	P43621	546 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	TEL2	P53038	688 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	GPD1	Q00055	391 aa	Known RBP	4.68	□□□□□ -1.66
UTP5	YDR398W	SIR3	P06701	978 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	PRP19	P32523	503 aa	Known RBP	4.68	□□□□□ -1.66
UTP5	YDR398W	TYS1	P36421	394 aa	Known RBP	4.68	□□□□□ -1.66
UTP5	YDR398W	TDA3	P38758	523 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	REV7	P38927	245 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	NUP60	P39705	539 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	UBA2	P52488	636 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	UME1	Q03010	460 aa		4.68	□□□□□ -1.66
UTP5	YDR398W	HBT1	Q07653	1046 aa	Known RBP	4.68	□□□□□ -1.66
UTP5	YDR398W	NUP145	P49687	1317 aa		4.67	□□□□□ -1.66
UTP5	YDR398W	MVD1	P32377	396 aa	Known RBP	4.67	□□□□□ -1.66
UTP5	YDR398W	YHR202W	P38887	602 aa		4.67	□□□□□ -1.66
UTP5	YDR398W	NUG1	P40010	520 aa	Known RBP	4.67	□□□□□ -1.66
UTP5	YDR398W	MTQ2	Q03920	221 aa	Predicted RBP	4.67	□□□□□ -1.66
UTP5	YDR398W	TMN2	Q04562	672 aa		4.67	□□□□□ -1.66
UTP5	YDR398W	BEM4	P39011	633 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	NOP9	P47077	666 aa	Known RBP	4.66	□□□□□ -1.66
UTP5	YDR398W	COX18	P53239	316 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	YAP1802	P53309	568 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	YKL033W-A	Q86ZR7	236 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	YKR075C	P36155	307 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	PCL5	P38794	229 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	PAN2	P53010	1115 aa	Predicted RBP	4.66	□□□□□ -1.66
UTP5	YDR398W	ECM3	Q99252	613 aa		4.66	□□□□□ -1.66
UTP5	YDR398W	PEX1	P24004	1043 aa		4.65	□□□□□ -1.67
UTP5	YDR398W	YNL195C	P40168	261 aa		4.65	□□□□□ -1.67
UTP5	YDR398W	SDS3	P40505	327 aa		4.65	□□□□□ -1.67
UTP5	YDR398W	YGR153W	P48238	217 aa		4.65	□□□□□ -1.67
UTP5	YDR398W	GPG1	P53130	126 aa		4.65	□□□□□ -1.67
UTP5	YDR398W	RGC1	Q06108	1083 aa	Known RBP	4.65	□□□□□ -1.67
UTP5	YDR398W	ISA1	Q07821	250 aa	Predicted RBP	4.65	□□□□□ -1.67
UTP5	YDR398W	SFB3	P38810	929 aa		4.64	□□□□□ -1.67
UTP5	YDR398W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
UTP5	YDR398W	CCT5	P40413	562 aa	Known RBP	4.64	□□□□□ -1.67
UTP5	YDR398W	RSC8	P43609	557 aa	Known RBP	4.64	□□□□□ -1.67
UTP5	YDR398W	BFA1	P47113	574 aa		4.64	□□□□□ -1.67
UTP5	YDR398W	YGL081W	P53156	320 aa		4.64	□□□□□ -1.67
UTP5	YDR398W	SSL2	Q00578	843 aa		4.64	□□□□□ -1.67
UTP5	YDR398W	IMG2	P25642	146 aa	Predicted RBP	4.64	□□□□□ -1.67
UTP5	YDR398W	GZF3	P42944	551 aa	Known RBP	4.64	□□□□□ -1.67
UTP5	YDR398W	YGR237C	P50089	785 aa		4.64	□□□□□ -1.67
UTP5	YDR398W	THI22	Q06490	572 aa		4.64	□□□□□ -1.67
UTP5	YDR398W	DIA2	Q08496	732 aa	Predicted RBP	4.64	□□□□□ -1.67
UTP5	YDR398W	MTH1	P35198	433 aa		4.63	□□□□□ -1.67
UTP5	YDR398W	FHN1	P53279	174 aa		4.63	□□□□□ -1.67
UTP5	YDR398W	GND2	P53319	492 aa		4.63	□□□□□ -1.67
UTP5	YDR398W	YLR407W	Q06070	228 aa		4.63	□□□□□ -1.67
UTP5	YDR398W	YTM1	Q12024	460 aa	Predicted RBP	4.63	□□□□□ -1.67
UTP5	YDR398W	CLF1	Q12309	687 aa	Predicted RBP	4.63	□□□□□ -1.67
UTP5	YDR398W	PET127	P32606	800 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	PHO11	P35842	467 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	PHO12	P38693	467 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	SMX3	P54999	86 aa	Predicted RBP	4.62	□□□□□ -1.67
UTP5	YDR398W	ECM9	Q02202	377 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	HFD1	Q04458	532 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	VHS3	Q08438	674 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	ERG20	P08524	352 aa	Known RBP	4.62	□□□□□ -1.67
UTP5	YDR398W	SWI6	P09959	803 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	YKU70	P32807	602 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	CBR1	P38626	284 aa	Known RBP	4.62	□□□□□ -1.67
UTP5	YDR398W	OAF1	P39720	1047 aa	Predicted RBP	4.62	□□□□□ -1.67
UTP5	YDR398W	GPP1	P41277	250 aa	Known RBP	4.62	□□□□□ -1.67
UTP5	YDR398W	YMR210W	Q03649	449 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	VPS36	Q06696	566 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	IRC10	Q08118	586 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	FAP7	Q12055	197 aa	Predicted RBP	4.62	□□□□□ -1.67
UTP5	YDR398W	ZRT2	Q12436	422 aa		4.62	□□□□□ -1.67
UTP5	YDR398W	FRS1	P15624	595 aa	Known RBP	4.61	□□□□□ -1.67
UTP5	YDR398W	SEC6	P32844	805 aa		4.61	□□□□□ -1.67
UTP5	YDR398W	YPT7	P32939	208 aa		4.61	□□□□□ -1.67
UTP5	YDR398W	BIT2	P38346	545 aa		4.61	□□□□□ -1.67
UTP5	YDR398W	HXT6	P39003	570 aa	Known RBP	4.61	□□□□□ -1.67
UTP5	YDR398W	HXT7	P39004	570 aa		4.61	□□□□□ -1.67
UTP5	YDR398W	UBP12	P39538	1254 aa		4.61	□□□□□ -1.67
UTP5	YDR398W	RPS21B	Q3E754	87 aa	Known RBP	4.61	□□□□□ -1.67
UTP5	YDR398W	STU2	P46675	888 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	MNN11	P46985	422 aa	Known RBP	4.6	□□□□□ -1.67
UTP5	YDR398W	MLH3	Q12083	715 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	MRH1	Q12117	320 aa	Predicted RBP	4.6	□□□□□ -1.67
UTP5	YDR398W	POM34	Q12445	299 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	BCS1	P32839	456 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	PIG2	P40187	538 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	NDC80	P40460	691 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	QRI1	P43123	477 aa	Known RBP	4.6	□□□□□ -1.67
UTP5	YDR398W	BIT61	P47041	543 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	RCR2	Q03446	210 aa	Known RBP	4.6	□□□□□ -1.67
UTP5	YDR398W	YPS7	Q06325	596 aa		4.6	□□□□□ -1.67
UTP5	YDR398W	THR1	P17423	357 aa	Known RBP	4.59	□□□□□ -1.67
UTP5	YDR398W	PRP28	P23394	588 aa		4.59	□□□□□ -1.67
UTP5	YDR398W	SEC65	P29478	273 aa		4.59	□□□□□ -1.67
UTP5	YDR398W	OAF3	P36023	863 aa		4.59	□□□□□ -1.67
UTP5	YDR398W	HFI1	Q12060	488 aa		4.59	□□□□□ -1.67
UTP5	YDR398W	APM4	Q99186	491 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms