RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	MUK1	Q02866	612 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	ADY4	Q05955	493 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	IRC10	Q08118	586 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	HAL9	Q12180	1030 aa		5.75	□□□□□ -1.49
RPC53	YDL150W	CYS3	P31373	394 aa	Known RBP	5.74	□□□□□ -1.49
RPC53	YDL150W	ALG2	P43636	503 aa		5.74	□□□□□ -1.49
RPC53	YDL150W	STU2	P46675	888 aa		5.74	□□□□□ -1.49
RPC53	YDL150W	LYS4	P49367	693 aa	Predicted RBP	5.74	□□□□□ -1.49
RPC53	YDL150W	NIT3	P49954	291 aa		5.74	□□□□□ -1.49
RPC53	YDL150W	YGR283C	P53336	341 aa	Predicted RBP	5.74	□□□□□ -1.49
RPC53	YDL150W	TY4B-H	P0C2J7	1802 aa		5.74	□□□□□ -1.49
RPC53	YDL150W	TY4B-J	P47024	1803 aa		5.74	□□□□□ -1.49
RPC53	YDL150W	PSK1	P31374	1356 aa		5.73	□□□□□ -1.49
RPC53	YDL150W	ESL2	P36168	1195 aa		5.73	□□□□□ -1.49
RPC53	YDL150W	VHR1	P40522	640 aa		5.73	□□□□□ -1.49
RPC53	YDL150W	PUS2	P53167	370 aa		5.73	□□□□□ -1.49
RPC53	YDL150W	CAF20	P12962	161 aa	Known RBP	5.72	□□□□□ -1.49
RPC53	YDL150W	GSY1	P23337	708 aa		5.72	□□□□□ -1.49
RPC53	YDL150W	MTH1	P35198	433 aa		5.72	□□□□□ -1.49
RPC53	YDL150W	YBR053C	P38235	358 aa		5.72	□□□□□ -1.49
RPC53	YDL150W	NPR2	P39923	615 aa		5.72	□□□□□ -1.49
RPC53	YDL150W	FKH2	P41813	862 aa		5.72	□□□□□ -1.49
RPC53	YDL150W	DAM1	P53267	343 aa		5.72	□□□□□ -1.49
RPC53	YDL150W	MUS81	Q04149	632 aa	Predicted RBP	5.72	□□□□□ -1.49
RPC53	YDL150W	ROM2	P51862	1356 aa	Known RBP	5.71	□□□□□ -1.5
RPC53	YDL150W	PPS1	P38148	807 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	YHL017W	P38745	532 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	GYP8	P43570	497 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	DAS1	P47005	663 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	MUP1	P50276	574 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	MAL11	P53048	616 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	YGL081W	P53156	320 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	YMR206W	Q03695	313 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	THI21	Q08975	551 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	YGR161W-C	Q3E744	92 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	MDM12	Q92328	271 aa		5.71	□□□□□ -1.5
RPC53	YDL150W	YEF3	P16521	1044 aa	Known RBP	5.7	□□□□□ -1.5
RPC53	YDL150W	DAL7	P21826	554 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	PEX6	P33760	1030 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	SDS3	P40505	327 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	AMA1	P50082	593 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	PKH1	Q03407	766 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	NTG2	Q08214	380 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	YOR022C	Q12204	715 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	GPR1	Q12361	961 aa		5.7	□□□□□ -1.5
RPC53	YDL150W	NOP14	Q99207	810 aa	Known RBP	5.7	□□□□□ -1.5
RPC53	YDL150W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
RPC53	YDL150W	NGG1	P32494	702 aa		5.69	□□□□□ -1.5
RPC53	YDL150W	SPC29	P33419	253 aa		5.69	□□□□□ -1.5
RPC53	YDL150W	TAD1	P53065	400 aa		5.69	□□□□□ -1.5
RPC53	YDL150W	GND2	P53319	492 aa		5.69	□□□□□ -1.5
RPC53	YDL150W	HBT1	Q07653	1046 aa	Known RBP	5.69	□□□□□ -1.5
RPC53	YDL150W	YLR415C	O13578	112 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	SFP1	P32432	683 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	PZF1	P39933	429 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	SSY5	P47002	699 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	ATP25	Q03153	612 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	YML122C	Q03207	126 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	LRS4	Q04087	347 aa	Known RBP	5.68	□□□□□ -1.5
RPC53	YDL150W	REH1	Q06709	432 aa		5.68	□□□□□ -1.5
RPC53	YDL150W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
RPC53	YDL150W	URB1	P34241	1764 aa	Known RBP	5.67	□□□□□ -1.5
RPC53	YDL150W	YLR419W	Q06698	1435 aa	Known RBP	5.67	□□□□□ -1.5
RPC53	YDL150W	YCL002C	P25565	263 aa		5.67	□□□□□ -1.5
RPC53	YDL150W	SIC1	P38634	284 aa		5.67	□□□□□ -1.5
RPC53	YDL150W	PFA3	P42836	336 aa		5.67	□□□□□ -1.5
RPC53	YDL150W	YJL163C	P46996	555 aa		5.67	□□□□□ -1.5
RPC53	YDL150W	RSF2	P46974	1380 aa		5.67	□□□□□ -1.5
RPC53	YDL150W	SAK1	P38990	1142 aa		5.66	□□□□□ -1.5
RPC53	YDL150W	DSS1	P39112	969 aa		5.66	□□□□□ -1.5
RPC53	YDL150W	YIR042C	P40586	236 aa		5.66	□□□□□ -1.5
RPC53	YDL150W	HXT16	P47185	567 aa		5.66	□□□□□ -1.5
RPC53	YDL150W	NRG1	Q03125	231 aa		5.66	□□□□□ -1.5
RPC53	YDL150W	YDR514C	Q04408	483 aa		5.66	□□□□□ -1.5
RPC53	YDL150W	PRC1	P00729	532 aa		5.65	□□□□□ -1.5
RPC53	YDL150W	LAT1	P12695	482 aa	Known RBP	5.65	□□□□□ -1.5
RPC53	YDL150W	SPE2	P21182	396 aa		5.65	□□□□□ -1.5
RPC53	YDL150W	ATF1	P40353	525 aa		5.65	□□□□□ -1.5
RPC53	YDL150W	YJR142W	P47173	342 aa		5.65	□□□□□ -1.5
RPC53	YDL150W	YBR182C-A	Q8TGU6	64 aa		5.65	□□□□□ -1.5
RPC53	YDL150W	ADE6	P38972	1358 aa	Known RBP	5.65	□□□□□ -1.51
RPC53	YDL150W	MEF1	P25039	761 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	VBA3	P25594	458 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	YEL1	P34225	687 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	SET5	P38890	526 aa	Known RBP	5.64	□□□□□ -1.51
RPC53	YDL150W	TFB2	Q02939	513 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	RSC3	Q06639	885 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	MET7	Q08645	548 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	ATG11	Q12527	1178 aa		5.64	□□□□□ -1.51
RPC53	YDL150W	YIL177C	P40434	1758 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	YJL225C	P40889	1758 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	RPL8A	P17076	256 aa	Known RBP	5.63	□□□□□ -1.51
RPC53	YDL150W	STO1	P34160	861 aa	Known RBP	5.63	□□□□□ -1.51
RPC53	YDL150W	MTC2	P34246	357 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	YKL133C	P36066	463 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	TY4A-J	P47023	414 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	COG8	Q04632	607 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	TGL5	Q12043	749 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	SLM3	Q12093	417 aa		5.63	□□□□□ -1.51
RPC53	YDL150W	YKR075C	P36155	307 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms