RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 ATF3P18847 181 aa21.01■□□□□ 0.95
CROCCP2-204ENST00000639456 GJB4Q9NTQ9 266 aa21.01■□□□□ 0.95
CROCCP2-204ENST00000639456 ZSCAN16Q9H4T2 348 aaPredicted RBP21.01■□□□□ 0.95
CROCCP2-204ENST00000639456 CWC25Q9NXE8 425 aaPredicted RBP21.01■□□□□ 0.95
CROCCP2-204ENST00000639456 CLIP2Q9UDT6 1046 aa21.01■□□□□ 0.95
CROCCP2-204ENST00000639456 SH3TC1Q8TE82 1336 aa21.01■□□□□ 0.95
CROCCP2-204ENST00000639456 PLA2G4DQ86XP0 818 aa21■□□□□ 0.95
CROCCP2-204ENST00000639456 OSBP2Q969R2 916 aa21■□□□□ 0.95
CROCCP2-204ENST00000639456 ME1P48163 572 aa20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 ZMYM1Q5SVZ6 1142 aa20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 ZSCAN25Q6NSZ9 544 aa20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 TDRD7Q8NHU6 1098 aaKnown RBP20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 CACTINQ8WUQ7 758 aaKnown RBP20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■■■■□ 19.8
CROCCP2-204ENST00000639456 PDIA3P30101 505 aaKnown RBP20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 ADORA1P30542 326 aa20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 ILDR1Q86SU0 546 aaPredicted RBP20.99■□□□□ 0.95
CROCCP2-204ENST00000639456 POLR3DP05423 398 aaPredicted RBP20.98■□□□□ 0.95
CROCCP2-204ENST00000639456 SNW1Q13573 536 aaKnown RBP20.98■□□□□ 0.95
CROCCP2-204ENST00000639456 WASHC4Q2M389 1173 aa20.98■□□□□ 0.95
CROCCP2-204ENST00000639456 TPM3P06753 285 aa20.97■□□□□ 0.95
CROCCP2-204ENST00000639456 GTF2F1P35269 517 aaKnown RBP eCLIP20.97■□□□□ 0.958e-7■■□□□ 11.7
CROCCP2-204ENST00000639456 CHAF1AQ13111 956 aaPredicted RBP20.97■□□□□ 0.95
CROCCP2-204ENST00000639456 HELLSQ9NRZ9 838 aa20.97■□□□□ 0.95
CROCCP2-204ENST00000639456 GOLGA6L19H0YKK7 550 aa20.97■□□□□ 0.95
CROCCP2-204ENST00000639456 EYA2O00167 538 aa20.97■□□□□ 0.95
CROCCP2-204ENST00000639456 DSCC1Q9BVC3 393 aa20.97■□□□□ 0.95
CROCCP2-204ENST00000639456 HMGB1P09429 215 aaKnown RBP20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 IL15P40933 162 aaPredicted RBP20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 SCARF1Q14162 830 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 IQCB1Q15051 598 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 A0A1B0GVL5 298 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 RNF113AO15541 343 aaKnown RBP20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 FDPSP14324 419 aaKnown RBP20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 GORABQ5T7V8 394 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 FSIP1Q8NA03 581 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 PALLDQ8WX93 1383 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 RCOR1Q9UKL0 485 aa20.96■□□□□ 0.95
CROCCP2-204ENST00000639456 SYNE4Q8N205 404 aa20.95■□□□□ 0.95
CROCCP2-204ENST00000639456 LLPHQ9BRT6 129 aaKnown RBP20.95■□□□□ 0.95
CROCCP2-204ENST00000639456 CCDC73Q6ZRK6 1079 aa20.95■□□□□ 0.94
CROCCP2-204ENST00000639456 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
CROCCP2-204ENST00000639456 CBX1P83916 185 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 NAA16Q6N069 864 aaPredicted RBP20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 MTERF4Q7Z6M4 381 aaKnown RBP20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 ALS2Q96Q42 1657 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 RFX7Q2KHR2 1363 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 BECN2A8MW95 431 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 KINO60870 393 aaKnown RBP20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 NAA30Q147X3 362 aaPredicted RBP20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 PPP4R3BQ5MIZ7 849 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 TOM1L2Q6ZVM7 507 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 ZNF592Q92610 1267 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 DENND2AQ9ULE3 1009 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 CARMIL3Q8ND23 1372 aa20.94■□□□□ 0.94
CROCCP2-204ENST00000639456 FOXP2O15409 715 aa20.93■□□□□ 0.94
CROCCP2-204ENST00000639456 TMEM94Q12767 1356 aa20.93■□□□□ 0.94
CROCCP2-204ENST00000639456 AGXT2Q9BYV1 514 aa20.93■□□□□ 0.94
CROCCP2-204ENST00000639456 CEP126Q9P2H0 1117 aa20.93■□□□□ 0.94
CROCCP2-204ENST00000639456 PCDHA7Q9UN72 937 aa20.93■□□□□ 0.94
CROCCP2-204ENST00000639456 SALL1Q9NSC2 1324 aa20.93■□□□□ 0.94
CROCCP2-204ENST00000639456 SPDYE4A6NLX3 237 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 USP27XA6NNY8 438 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 KLHL34Q8N239 644 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 CCDC94Q9BW85 323 aaPredicted RBP20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 PUS7LQ9H0K6 701 aaKnown RBP20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 CLIC4Q9Y696 253 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 FGAP02671 866 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 TNNT1P13805 278 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 TTC39AQ5SRH9 613 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 XAGE2Q96GT9 111 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 PKNOX2Q96KN3 472 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 CCDC57Q2TAC2 916 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 ENGASEQ8NFI3 743 aa20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
CROCCP2-204ENST00000639456 ZAP70P43403 619 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 STX1AQ16623 288 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 ATP2B3Q16720 1220 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 TPD52L1Q16890 204 aaPredicted RBP20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 DHX40Q8IX18 779 aaKnown RBP20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 AOPEPQ8N6M6 819 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 SDF4Q9BRK5 362 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 BIN1O00499 593 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 FAM160A1Q05DH4 1040 aa20.91■□□□□ 0.94
CROCCP2-204ENST00000639456 COL18A1P39060 1754 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 KLF18A0A0U1RQI7 1052 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 RXRAP19793 462 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 NDUFA8P51970 172 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 CCDC191Q8NCU4 936 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 ZNF396Q96N95 335 aaPredicted RBP20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 LMTK3Q96Q04 1460 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 MST1RQ04912 1400 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 KAT6BQ8WYB5 2073 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 ISM2Q6H9L7 571 aa20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 ZNF274Q96GC6 653 aaPredicted RBP20.9■□□□□ 0.94
CROCCP2-204ENST00000639456 TRMT1Q9NXH9 659 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms