RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 MGEA5O60502 916 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 IFIT1BQ5T764 474 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 MICU3Q86XE3 530 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 RAB11FIP4Q86YS3 637 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 NEK1Q96PY6 1258 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 PFDN4Q9NQP4 134 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 SPDYE3A6NKU9 549 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 TTC36A6NLP5 189 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 VWA3BQ502W6 1294 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 RILPL1Q5EBL4 403 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 MAP3K21Q5TCX8 1036 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 SEL1L2Q5TEA6 688 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 BIN1O00499 593 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 SYT1P21579 422 aa20.34■□□□□ 0.85
CACNA1A-247ENST00000637769 SELENOSQ9BQE4 189 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 RABGAP1Q9Y3P9 1069 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 RTL9Q8NET4 1388 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 ORC3Q9UBD5 711 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 MRVI1Q9Y6F6 885 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 CALM1P0DP23 149 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 CALM2P0DP24 149 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 CALM3P0DP25 149 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.85
CACNA1A-247ENST00000637769 PPP1R42Q7Z4L9 355 aa20.33■□□□□ 0.84
CACNA1A-247ENST00000637769 HVCN1Q96D96 273 aa20.33■□□□□ 0.84
CACNA1A-247ENST00000637769 CCDC61Q9Y6R9 512 aa20.33■□□□□ 0.84
CACNA1A-247ENST00000637769 TSPY3P0CV98 308 aa20.33■□□□□ 0.84
CACNA1A-247ENST00000637769 TSPY8P0CW00 308 aa20.33■□□□□ 0.84
CACNA1A-247ENST00000637769 STK24Q9Y6E0 443 aa20.33■□□□□ 0.84
CACNA1A-247ENST00000637769 UQCRFS1P1P0C7P4 283 aa20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 CCT2P78371 535 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 SLFN5Q08AF3 891 aa20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 UTP11Q9Y3A2 253 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 CETN3O15182 167 aa20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 ARHGAP25P42331 645 aa20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 CFAP70Q5T0N1 1121 aa20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 TRIM14Q14142 442 aa20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 SDCCAG8Q86SQ7 713 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-247ENST00000637769 MYCNP04198 464 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 PIK3R4Q99570 1358 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 FAM13AO94988 1023 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 GNAT2P19087 354 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 SLC26A6Q9BXS9 759 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 UBL4BQ8N7F7 174 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 ZBTB43O43298 467 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 RRAGBQ5VZM2 374 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 ATP2C2O75185 946 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 CEP85LQ5SZL2 805 aa20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 NOC2LQ9Y3T9 749 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-247ENST00000637769 ZSCAN22P10073 491 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 ATP2A3Q93084 1043 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 GNA11P29992 359 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 GUCY1B3Q02153 619 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 ZSCAN23Q3MJ62 389 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 SLC12A5Q9H2X9 1139 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 ZEB2O60315 1214 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 PLCG2P16885 1265 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 RASSF4Q9H2L5 321 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 PLCB1Q9NQ66 1216 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 PPFIA1Q13136 1202 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 NAA25Q14CX7 972 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 RTN1Q16799 776 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 MRPS27Q92552 414 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 PCK1P35558 622 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 ST5P78524 1137 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 TMOD4Q9NZQ9 345 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 DNAI1Q9UI46 699 aa20.3■□□□□ 0.84
CACNA1A-247ENST00000637769 HAUS7Q99871 368 aa20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 HAUS8Q9BT25 410 aa20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 TAF12Q16514 161 aa20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 ANO6Q4KMQ2 910 aa20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 E7EVH7 732 aa20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 NAP1L4Q99733 375 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 CFTRP13569 1480 aa20.29■□□□□ 0.84
CACNA1A-247ENST00000637769 LGSNQ5TDP6 509 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 ZSWIM4Q9H7M6 989 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 RNF168Q8IYW5 571 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 ERCC5P28715 1186 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 ITIH3Q06033 890 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 STX8Q9UNK0 236 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 A0A1B0GUL7 405 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 RSPH3Q86UC2 560 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 I3L4J1 428 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 ZBTB17Q13105 803 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 NOLC1Q14978 699 aaKnown RBP eCLIP20.28■□□□□ 0.84
CACNA1A-247ENST00000637769 ASIC1P78348 528 aa20.27■□□□□ 0.84
CACNA1A-247ENST00000637769 CUL4BQ13620 913 aa20.27■□□□□ 0.84
CACNA1A-247ENST00000637769 STX10O60499 249 aa20.27■□□□□ 0.84
CACNA1A-247ENST00000637769 MCUR1Q96AQ8 359 aa20.27■□□□□ 0.84
CACNA1A-247ENST00000637769 KCNK9Q9NPC2 374 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms