RNA–Protein interactions for RNA: ENST00000636180.1

CLCN2-210, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 3,019 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-210ENST00000636180 PDIA3P30101 505 aaKnown RBP20.19■□□□□ 0.82
CLCN2-210ENST00000636180 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 DENND2AQ9ULE3 1009 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 A0A1B0GVL5 298 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 NAA30Q147X3 362 aaPredicted RBP20.19■□□□□ 0.82
CLCN2-210ENST00000636180 CBX1P83916 185 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 ISM2Q6H9L7 571 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 ZSCAN25Q6NSZ9 544 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
CLCN2-210ENST00000636180 SPDYE4A6NLX3 237 aa20.18■□□□□ 0.82
CLCN2-210ENST00000636180 GOLGA6L19H0YKK7 550 aa20.18■□□□□ 0.82
CLCN2-210ENST00000636180 ZMYM1Q5SVZ6 1142 aa20.18■□□□□ 0.82
CLCN2-210ENST00000636180 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
CLCN2-210ENST00000636180 FSIP1Q8NA03 581 aa20.18■□□□□ 0.82
CLCN2-210ENST00000636180 EYA2O00167 538 aa20.18■□□□□ 0.82
CLCN2-210ENST00000636180 ZSCAN16Q9H4T2 348 aaPredicted RBP20.18■□□□□ 0.82
CLCN2-210ENST00000636180 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
CLCN2-210ENST00000636180 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
CLCN2-210ENST00000636180 EXOSC10Q01780 885 aaKnown RBP20.17■□□□□ 0.82
CLCN2-210ENST00000636180 RNF113AO15541 343 aaKnown RBP20.17■□□□□ 0.82
CLCN2-210ENST00000636180 RXRAP19793 462 aa20.17■□□□□ 0.82
CLCN2-210ENST00000636180 PLA2G4DQ86XP0 818 aa20.17■□□□□ 0.82
CLCN2-210ENST00000636180 AFDNP55196 1824 aaKnown RBP20.17■□□□□ 0.82
CLCN2-210ENST00000636180 BIN1O00499 593 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
CLCN2-210ENST00000636180 SH3TC1Q8TE82 1336 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 BECN2A8MW95 431 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 FDPSP14324 419 aaKnown RBP20.16■□□□□ 0.82
CLCN2-210ENST00000636180 IL15P40933 162 aaPredicted RBP20.16■□□□□ 0.82
CLCN2-210ENST00000636180 SNW1Q13573 536 aaKnown RBP20.16■□□□□ 0.82
CLCN2-210ENST00000636180 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 CCDC73Q6ZRK6 1079 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
CLCN2-210ENST00000636180 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
CLCN2-210ENST00000636180 GPTP24298 496 aa20.15■□□□□ 0.82
CLCN2-210ENST00000636180 RBM43Q6ZSC3 357 aaKnown RBP20.15■□□□□ 0.82
CLCN2-210ENST00000636180 NKX2-3Q8TAU0 364 aa20.15■□□□□ 0.82
CLCN2-210ENST00000636180 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
CLCN2-210ENST00000636180 PHRF1Q9P1Y6 1649 aaKnown RBP20.15■□□□□ 0.82
CLCN2-210ENST00000636180 USP27XA6NNY8 438 aa20.15■□□□□ 0.82
CLCN2-210ENST00000636180 KINO60870 393 aaKnown RBP20.15■□□□□ 0.82
CLCN2-210ENST00000636180 ZAP70P43403 619 aa20.15■□□□□ 0.82
CLCN2-210ENST00000636180 SYTL4Q96C24 671 aaPredicted RBP20.15■□□□□ 0.82
CLCN2-210ENST00000636180 TRMT1Q9NXH9 659 aaKnown RBP20.15■□□□□ 0.82
CLCN2-210ENST00000636180 CLIC4Q9Y696 253 aa20.15■□□□□ 0.82
CLCN2-210ENST00000636180 TPD52L1Q16890 204 aaPredicted RBP20.14■□□□□ 0.82
CLCN2-210ENST00000636180 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.82
CLCN2-210ENST00000636180 TAF7LQ5H9L4 462 aa20.14■□□□□ 0.82
CLCN2-210ENST00000636180 XAGE2Q96GT9 111 aa20.14■□□□□ 0.82
CLCN2-210ENST00000636180 SDF4Q9BRK5 362 aa20.14■□□□□ 0.82
CLCN2-210ENST00000636180 RCOR1Q9UKL0 485 aa20.14■□□□□ 0.82
CLCN2-210ENST00000636180 TMEM94Q12767 1356 aa20.14■□□□□ 0.81
CLCN2-210ENST00000636180 IQCB1Q15051 598 aa20.14■□□□□ 0.81
CLCN2-210ENST00000636180 ZCRB1Q8TBF4 217 aaKnown RBP20.14■□□□□ 0.81
CLCN2-210ENST00000636180 DSCC1Q9BVC3 393 aa20.14■□□□□ 0.81
CLCN2-210ENST00000636180 PRDM11Q9NQV5 511 aa20.14■□□□□ 0.81
CLCN2-210ENST00000636180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.81
CLCN2-210ENST00000636180 PCDHA7Q9UN72 937 aa20.14■□□□□ 0.81
CLCN2-210ENST00000636180 FGAP02671 866 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 AOPEPQ8N6M6 819 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 MRC1P22897 1456 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 HMGB1P09429 215 aaKnown RBP20.13■□□□□ 0.81
CLCN2-210ENST00000636180 PDIA4P13667 645 aaKnown RBP20.13■□□□□ 0.81
CLCN2-210ENST00000636180 TNNT1P13805 278 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 SF3A1Q15459 793 aaKnown RBP20.13■□□□□ 0.81
CLCN2-210ENST00000636180 AIFM3Q96NN9 605 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 KLF18A0A0U1RQI7 1052 aa20.13■□□□□ 0.81
CLCN2-210ENST00000636180 FOXP2O15409 715 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 TPM3P06753 285 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 NDUFA8P51970 172 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 ATP2B3Q16720 1220 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 STK11IPQ8N1F8 1099 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 INCENPQ9NQS7 918 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
CLCN2-210ENST00000636180 NAA16Q6N069 864 aaPredicted RBP20.11■□□□□ 0.81
CLCN2-210ENST00000636180 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
CLCN2-210ENST00000636180 GOLGA8BA8MQT2 603 aa20.11■□□□□ 0.81
CLCN2-210ENST00000636180 PRC1O43663 620 aa20.11■□□□□ 0.81
CLCN2-210ENST00000636180 CCDC158Q5M9N0 1113 aa20.11■□□□□ 0.81
CLCN2-210ENST00000636180 PKNOX2Q96KN3 472 aa20.11■□□□□ 0.81
CLCN2-210ENST00000636180 LLPHQ9BRT6 129 aaKnown RBP20.11■□□□□ 0.81
CLCN2-210ENST00000636180 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.11■□□□□ 0.81
CLCN2-210ENST00000636180 V9GYY5 206 aaPredicted RBP20.11■□□□□ 0.81
CLCN2-210ENST00000636180 APPP05067 770 aa20.1■□□□□ 0.81
CLCN2-210ENST00000636180 U2AF2P26368 475 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLCN2-210ENST00000636180 MARCKSP29966 332 aaPredicted RBP20.1■□□□□ 0.81
CLCN2-210ENST00000636180 PTPN21Q16825 1174 aa20.1■□□□□ 0.81
CLCN2-210ENST00000636180 STK38Q15208 465 aa20.1■□□□□ 0.81
CLCN2-210ENST00000636180 STX1AQ16623 288 aa20.1■□□□□ 0.81
CLCN2-210ENST00000636180 DHX40Q8IX18 779 aaKnown RBP20.1■□□□□ 0.81
CLCN2-210ENST00000636180 ZNF396Q96N95 335 aaPredicted RBP20.1■□□□□ 0.81
CLCN2-210ENST00000636180 GTF2F1P35269 517 aaKnown RBP eCLIP20.09■□□□□ 0.81
CLCN2-210ENST00000636180 C8orf76Q96K31 380 aa20.09■□□□□ 0.81
CLCN2-210ENST00000636180 CCDC94Q9BW85 323 aaPredicted RBP20.09■□□□□ 0.81
CLCN2-210ENST00000636180 ORC3Q9UBD5 711 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms