RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 CD2APQ9Y5K6 639 aa9.75□□□□□ -0.85
SMARCA2-243ENST00000635590 PARP3Q9Y6F1 533 aa9.75□□□□□ -0.85
SMARCA2-243ENST00000635590 TSPAN6O43657 245 aa9.74□□□□□ -0.85
SMARCA2-243ENST00000635590 LILRA1O75019 489 aa9.74□□□□□ -0.85
SMARCA2-243ENST00000635590 ZNF295-AS1Q8N0V1 137 aa9.74□□□□□ -0.85
SMARCA2-243ENST00000635590 JMYQ8N9B5 988 aa9.74□□□□□ -0.85
SMARCA2-243ENST00000635590 SLC39A13Q96H72 371 aa9.74□□□□□ -0.85
SMARCA2-243ENST00000635590 PPT2Q9UMR5 302 aa9.74□□□□□ -0.85
SMARCA2-243ENST00000635590 ALDH1L1O75891 902 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 ASMTLO95671 621 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 FAM50AQ14320 339 aaKnown RBP9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 C1orf53Q5VUE5 145 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 NME8Q8N427 588 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 NBPF15Q8N660 670 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 TNIKQ9UKE5 1360 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 PBRM1Q86U86 1689 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 ABCA10Q8WWZ4 1543 aa9.73□□□□□ -0.85
SMARCA2-243ENST00000635590 PHACTR2O75167 634 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 MICAL2O94851 1124 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 CRKP46108 304 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 APOBRQ0VD83 1088 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 LONRF3Q496Y0 759 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 SUV39H2Q9H5I1 410 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 ACTR10Q9NZ32 417 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 PTCH2Q9Y6C5 1203 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 ERCC6L2Q5T890 1561 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 PBX2P40425 430 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 SEPT6Q14141 434 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 GRIN2CQ14957 1233 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 TTF1Q15361 905 aaPredicted RBP9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 MAP3K11Q16584 847 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 MTERF2Q49AM1 385 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 PRPF40BQ6NWY9 871 aaKnown RBP9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 ZNF438Q7Z4V0 828 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 DDX42Q86XP3 938 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 IL17RAQ96F46 866 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 PLAAQ9Y263 795 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 GRIN2AQ12879 1464 aa9.72□□□□□ -0.85
SMARCA2-243ENST00000635590 PLIN1O60240 522 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 CAND2O75155 1236 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 OS9Q13438 667 aaPredicted RBP9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 C21orf62-AS1Q17RA5 79 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 PHC3Q8NDX5 983 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 NKD1Q969G9 470 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 MPHOSPH6Q99547 160 aaKnown RBP9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 RBSNQ9H1K0 784 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 TLR6Q9Y2C9 796 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 LAS1LQ9Y4W2 734 aaKnown RBP9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 CEP170Q5SW79 1584 aa9.71□□□□□ -0.85
SMARCA2-243ENST00000635590 NUP160Q12769 1436 aa9.71□□□□□ -0.86
SMARCA2-243ENST00000635590 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 EPHB1P54762 984 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 LRRC41Q15345 812 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 THNSL2Q86YJ6 484 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 CNKSR1Q969H4 720 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 SLC6A16Q9GZN6 736 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 GOLGA3Q08378 1498 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 CCDC189A1A4V9 331 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 LDHAP00338 332 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 PF4P02776 101 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 DHX9Q08211 1270 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 PPP2R5AQ15172 486 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 CTC1Q2NKJ3 1217 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 SLITRK4Q8IW52 837 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 SYNPOQ8N3V7 929 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 ABCA5Q8WWZ7 1642 aa9.7□□□□□ -0.86
SMARCA2-243ENST00000635590 MAFGO15525 162 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 RLBP1P12271 317 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 FSHRP23945 695 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 STAT3P40763 770 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 PDE12Q6L8Q7 609 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 GOLM1Q8NBJ4 401 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 CHAC2Q8WUX2 184 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 PFDN2Q9UHV9 154 aa9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 FCF1Q9Y324 198 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-243ENST00000635590 TK2O00142 265 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 GIPRP48546 466 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 EIF6P56537 245 aaKnown RBP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 PNISRQ8TF01 805 aaKnown RBP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 ESYT1Q9BSJ8 1104 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 TMEM63CQ9P1W3 806 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 ALG1L2C9J202 215 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 FBXO24O75426 580 aa9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 WDHD1O75717 1129 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 KRT18P05783 430 aaKnown RBP9.68□□□□□ -0.86
SMARCA2-243ENST00000635590 VARSP26640 1264 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms