RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 CTAGE5O15320 804 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 CAVIN2O95810 425 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 A1BGP04217 495 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 PLA2G4DQ86XP0 818 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 NRBP1Q9UHY1 535 aa12.56□□□□□ -0.4
PSPC1-207ENST00000635251 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
PSPC1-207ENST00000635251 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 RCOR1Q9UKL0 485 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 FAM177BA6PVY3 158 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 M0R2C6 588 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
PSPC1-207ENST00000635251 PDIA3P30101 505 aaKnown RBP12.55□□□□□ -0.4
PSPC1-207ENST00000635251 ADD1P35611 737 aaKnown RBP12.55□□□□□ -0.4
PSPC1-207ENST00000635251 ME1P48163 572 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 LRMPQ12912 555 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 STX1AQ16623 288 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 COL18A1P39060 1754 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
PSPC1-207ENST00000635251 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 BECN2A8MW95 431 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 ZSCAN25Q6NSZ9 544 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 TICAM2Q86XR7 235 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 AGXT2Q9BYV1 514 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 PUS3Q9BZE2 481 aaKnown RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 C11orf57Q6ZUT1 292 aaPredicted RBP12.54□□□□□ -0.4
PSPC1-207ENST00000635251 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
PSPC1-207ENST00000635251 CIAO1O76071 339 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 CTNNA3Q9UI47 895 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 HAND2P61296 217 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 IMMTQ16891 758 aaKnown RBP12.53□□□□□ -0.4
PSPC1-207ENST00000635251 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 LAMA4Q16363 1823 aa12.53□□□□□ -0.4
PSPC1-207ENST00000635251 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.4
PSPC1-207ENST00000635251 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.4
PSPC1-207ENST00000635251 IQCB1Q15051 598 aa12.52□□□□□ -0.41
PSPC1-207ENST00000635251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
PSPC1-207ENST00000635251 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.41
PSPC1-207ENST00000635251 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.41
PSPC1-207ENST00000635251 CCDC94Q9BW85 323 aaPredicted RBP12.52□□□□□ -0.41
PSPC1-207ENST00000635251 ANO10Q9NW15 660 aa12.52□□□□□ -0.41
PSPC1-207ENST00000635251 AKAP2Q9Y2D5 859 aa12.52□□□□□ -0.41
PSPC1-207ENST00000635251 GLI3P10071 1580 aa12.52□□□□□ -0.41
PSPC1-207ENST00000635251 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 CDC25BP30305 580 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
PSPC1-207ENST00000635251 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
PSPC1-207ENST00000635251 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 PKNOX2Q96KN3 472 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
PSPC1-207ENST00000635251 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 CACTINQ8WUQ7 758 aaKnown RBP12.51□□□□□ -0.41
PSPC1-207ENST00000635251 MRPS27Q92552 414 aaKnown RBP12.51□□□□□ -0.41
PSPC1-207ENST00000635251 XAGE2Q96GT9 111 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 PRDM11Q9NQV5 511 aa12.51□□□□□ -0.41
PSPC1-207ENST00000635251 ZFYP08048 801 aaPredicted RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 TNNT1P13805 278 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 ADORA1P30542 326 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 STK38Q15208 465 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 SARM1Q6SZW1 724 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 CEP57L1Q8IYX8 460 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 PCDHA7Q9UN72 937 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms