RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 ETFBP38117 255 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 SFSWAPQ12872 951 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 SCARF1Q14162 830 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 TCEAL1Q15170 157 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 TPTE2Q6XPS3 522 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 ANKS3Q6ZW76 656 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 ZKSCAN3Q9BRR0 538 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-220ENST00000634338 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 KLF4O43474 513 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 PSAPP07602 524 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 CELA3AP09093 270 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 ITPKAP23677 461 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 HSD3B2P26439 372 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 LMNB2Q03252 620 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 LAMC2Q13753 1193 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 NCAPG2Q86XI2 1143 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 SPACA7Q96KW9 195 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 OSMRQ99650 979 aa9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 TLR7Q9NYK1 1049 aaKnown RBP9.65□□□□□ -0.86
SMARCA2-220ENST00000634338 ATXN7O15265 892 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 PF4P02776 101 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 HYAL2Q12891 473 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 RAB33AQ14088 237 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 SNAP47Q5SQN1 464 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 TRIM55Q9BYV6 548 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 MRVI1Q9Y6F6 885 aa9.64□□□□□ -0.87
SMARCA2-220ENST00000634338 CLSTN1O94985 981 aa9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 PCNX4Q63HM2 1172 aa9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 PNMA5Q96PV4 448 aa9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 BHLHE41Q9C0J9 482 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 UBP1Q9NZI7 540 aa9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 PRKAG3Q9UGI9 489 aa9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 PCDHGC4Q9Y5F7 938 aa9.63□□□□□ -0.87
SMARCA2-220ENST00000634338 ENPP3O14638 875 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 MAP3K6O95382 1288 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 NFKB1P19838 968 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 GRIA4P48058 902 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 RPS26P62854 115 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 PLAURQ03405 335 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 AGMOQ6ZNB7 445 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 GOLM1Q8NBJ4 401 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 NECAB3Q96P71 396 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 SRPK1Q96SB4 655 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 DZANK1Q9NVP4 752 aa9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
SMARCA2-220ENST00000634338 ENC1O14682 589 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 KHNYNO15037 678 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 ACPPP15309 386 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 RPS26P11Q5JNZ5 115 aaPredicted RBP9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 TTBK2Q6IQ55 1244 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 FAM196AQ6ZSG2 479 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 LRP10Q7Z4F1 713 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 SLITRK4Q8IW52 837 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 CEP120Q8N960 986 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 CPLX3Q8WVH0 158 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 HNRNPLLQ8WVV9 542 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 NKD1Q969G9 470 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 SRRTQ9BXP5 876 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 RB1CC1Q8TDY2 1594 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
SMARCA2-220ENST00000634338 NACADO15069 1562 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 BMP1P13497 986 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 TNP2Q05952 138 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 GRIN2CQ14957 1233 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 TMEM102Q8N9M5 508 aaPredicted RBP9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 LRRC3Q9BY71 257 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
SMARCA2-220ENST00000634338 ZCCHC6Q5VYS8 1495 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 SENP3-EIF4A1A0A087X0R7 540 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 AVPP01185 164 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 THBS1P07996 1170 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 CRKP46108 304 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 RASA3Q14644 834 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.874e-6■□□□□ 10.9
SMARCA2-220ENST00000634338 TRIM46Q7Z4K8 759 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 TRIM42Q8IWZ5 723 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 ANAPC16Q96DE5 110 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 SHDQ96IW2 340 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 DEPDC7Q96QD5 511 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 ZNF576Q9H609 170 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 SEC31BQ9NQW1 1179 aa9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 R3HCC1Q9Y3T6 440 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-220ENST00000634338 A0A096LPE4 126 aa9.58□□□□□ -0.88
SMARCA2-220ENST00000634338 A0A1W2PPZ6 126 aa9.58□□□□□ -0.88
SMARCA2-220ENST00000634338 NFKBIEO00221 500 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms