RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RAD54L2Q9Y4B4 1467 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 KLRG2A4D1S0 409 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 HTR3AP46098 478 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 ANO1Q5XXA6 986 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 SLF2Q8IX21 1173 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 ATXN2LQ8WWM7 1075 aaKnown RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 PAWRQ96IZ0 340 aaKnown RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 NELL2Q99435 816 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 TRIM55Q9BYV6 548 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 PGAP2Q9UHJ9 254 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 ABCC8Q09428 1581 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 KCNH2Q12809 1159 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 PPP4R3AQ6IN85 833 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 CFAP161Q6P656 301 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 RASSF3Q86WH2 238 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 PNMA1Q8ND90 353 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 EMID1Q96A84 441 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 ZNF830Q96NB3 372 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 FMNL2Q96PY5 1086 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 MKNK1Q9BUB5 465 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 C2orf49Q9BVC5 232 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 PDGFDQ9GZP0 370 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-213ENST00000630925 IP6K2Q9UHH9 426 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 IPPQ9Y573 584 aa5.89□□□□□ -1.47
SDCBP-213ENST00000630925 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 ZBTB24O43167 697 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-213ENST00000630925 IFIT2P09913 472 aaKnown RBP5.88□□□□□ -1.47
SDCBP-213ENST00000630925 LMNB1P20700 586 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 GNA15P30679 374 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 HOXC13P31276 330 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 HALP42357 657 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 NR1H3Q13133 447 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 NR6A1Q15406 480 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 SPECC1Q5M775 1068 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 WDR45BQ5MNZ6 344 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 IQCEQ6IPM2 695 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 HS2ST1Q7LGA3 356 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 HNRNPLLQ8WVV9 542 aaKnown RBP5.88□□□□□ -1.47
SDCBP-213ENST00000630925 UPF1Q92900 1129 aaKnown RBP eCLIP5.88□□□□□ -1.47
SDCBP-213ENST00000630925 TBC1D20Q96BZ9 403 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 ASPSCR1Q9BZE9 553 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 TMCC3Q9ULS5 477 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 LEMD3Q9Y2U8 911 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 MSRB2Q9Y3D2 182 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 CHMP3Q9Y3E7 222 aa5.88□□□□□ -1.47
SDCBP-213ENST00000630925 WIZO95785 1651 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 PTPRMP28827 1452 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 CCDC85CA6NKD9 419 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 GPR182O15218 404 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 PRPF3O43395 683 aaKnown RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 RHOBTB3O94955 611 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 RASGRP1O95267 797 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 SSBP05455 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 CNGA1P29973 690 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 LVRNQ6Q4G3 990 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 THNSL2Q86YJ6 484 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 IFNL2Q8IZJ0 200 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 SEC16BQ96JE7 1060 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 EYA1Q99502 592 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 CDH19Q9H159 772 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 CCDC87Q9NVE4 849 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 TMEM63CQ9P1W3 806 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 ADCY10Q96PN6 1610 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 A6NCN8 305 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 TRIM64CA6NLI5 447 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 NDUFB5O43674 189 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 FBXO45P0C2W1 286 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 PIK3CAP42336 1068 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 NEK3P51956 506 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 PURAQ00577 322 aaKnown RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 ERFEQ4G0M1 354 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 IL31Q6EBC2 164 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 UBE2Q1Q7Z7E8 422 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 MORC1Q86VD1 984 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 TTC30AQ86WT1 665 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 TCEAL8Q8IYN2 117 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 CLASRPQ8N2M8 674 aaKnown RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 JPH3Q8WXH2 748 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 ZNF496Q96IT1 587 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-213ENST00000630925 GGT7Q9UJ14 662 aa5.87□□□□□ -1.47
SDCBP-213ENST00000630925 USP31Q70CQ4 1352 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 SERPINB3P29508 390 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 STAT3P40763 770 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 PPM1FP49593 454 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-213ENST00000630925 ATP2B2Q01814 1243 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 NXNQ6DKJ4 435 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 ALKBH2Q6NS38 261 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 MMS22LQ6ZRQ5 1243 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 NKAIN3Q8N8D7 197 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 ENAHQ8N8S7 591 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-213ENST00000630925 ATRIPQ8WXE1 791 aa5.86□□□□□ -1.47
SDCBP-213ENST00000630925 JARID2Q92833 1246 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms