RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SLC8A1P32418 973 aa10.1□□□□□ -0.79
VCL-206ENST00000623461 CETN1Q12798 172 aa10.1□□□□□ -0.79
VCL-206ENST00000623461 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
VCL-206ENST00000623461 UBA7P41226 1012 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 TMEM67Q5HYA8 995 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 CEP85Q6P2H3 762 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 CYP26C1Q6V0L0 522 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 TSNAXIP1Q2TAA8 658 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 FANCCQ00597 558 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 TTF1Q15361 905 aaPredicted RBP10.09□□□□□ -0.79
VCL-206ENST00000623461 RUFY4Q6ZNE9 571 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 RPAINQ86UA6 219 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 GAS2L3Q86XJ1 694 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 EFCAB13Q8IY85 973 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 MEIS3Q99687 375 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 DNAI2Q9GZS0 605 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 IFT20Q8IY31 132 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 FAM71BQ8TC56 605 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 LRP2BPQ9P2M1 347 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 AOX1Q06278 1338 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 CDC25BP30305 580 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 PCK1P35558 622 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 DBF4Q9UBU7 674 aaPredicted RBP10.09□□□□□ -0.79
VCL-206ENST00000623461 FEZ2Q9UHY8 353 aaPredicted RBP10.09□□□□□ -0.79
VCL-206ENST00000623461 KLF18A0A0U1RQI7 1052 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 CABP4P57796 275 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 SMC6Q96SB8 1091 aa10.09□□□□□ -0.79
VCL-206ENST00000623461 BICDL2A1A5D9 508 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 CCDC160A6NGH7 325 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 MAP3K12Q12852 859 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 AP1ARQ63HQ0 302 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 CREB3L3Q68CJ9 461 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 LLPHQ9BRT6 129 aaKnown RBP10.08□□□□□ -0.8
VCL-206ENST00000623461 GCC2Q8IWJ2 1684 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 MCMDC2Q4G0Z9 681 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 CCDC122Q5T0U0 273 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 SLC26A6Q9BXS9 759 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 MTRF1LQ9UGC7 380 aaKnown RBP10.08□□□□□ -0.8
VCL-206ENST00000623461 NLRP12P59046 1061 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 TMTC2Q8N394 836 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 IFT81Q8WYA0 676 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 GOLGA8KD6RF30 607 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 AFAP1Q8N556 730 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 PPFIA4O75335 1185 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 RRP15Q9Y3B9 282 aaKnown RBP10.08□□□□□ -0.8
VCL-206ENST00000623461 UBXN1Q04323 297 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 WHAMMP3Q1A5X7 153 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 TSC1Q92574 1164 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 CFAP57Q96MR6 1250 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 INTS8Q75QN2 995 aaKnown RBP10.08□□□□□ -0.8
VCL-206ENST00000623461 CCDC26Q8TAB7 109 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 HOMER2Q9NSB8 354 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 TTC21BQ7Z4L5 1316 aa10.08□□□□□ -0.8
VCL-206ENST00000623461 GADD45BO75293 160 aaPredicted RBP10.07□□□□□ -0.8
VCL-206ENST00000623461 ALDH3A1P30838 453 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 CABS1Q96KC9 395 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
VCL-206ENST00000623461 AFMP43652 599 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 TMTC1Q8IUR5 882 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 LRRC45Q96CN5 670 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 IKBKGQ9Y6K9 419 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 PSDA5PKW4 1024 aaPredicted RBP10.07□□□□□ -0.8
VCL-206ENST00000623461 ZBTB7BO15156 539 aaPredicted RBP10.07□□□□□ -0.8
VCL-206ENST00000623461 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 STAT6P42226 847 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 CCDC61Q9Y6R9 512 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 PPP1R2P41236 205 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 MXRA7P84157 204 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 STMN2Q93045 179 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 TNNQ9UQP3 1299 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 IDEP14735 1019 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 MARCKSP29966 332 aaPredicted RBP10.07□□□□□ -0.8
VCL-206ENST00000623461 CCDC38Q502W7 563 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 MRFAP1L1Q96HT8 127 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 CAPN7Q9Y6W3 813 aa10.07□□□□□ -0.8
VCL-206ENST00000623461 PRAG1Q86YV5 1406 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 ZBTB43O43298 467 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 GCKP35557 465 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 ERCC6LQ2NKX8 1250 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 LRRC8AQ8IWT6 810 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 STRN4Q9NRL3 753 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 HSP90AA4PQ58FG1 418 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 C8orf74Q6P047 294 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 STXBP4Q6ZWJ1 553 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 IGSF22Q8N9C0 903 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 KIAA1524Q8TCG1 905 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 ZBTB16Q05516 673 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 CEP85LQ5SZL2 805 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.06□□□□□ -0.8
VCL-206ENST00000623461 LEO1Q8WVC0 666 aaPredicted RBP10.06□□□□□ -0.8
VCL-206ENST00000623461 NBPF7P0C2Y1 421 aaPredicted RBP10.06□□□□□ -0.8
VCL-206ENST00000623461 ANTXR1Q9H6X2 564 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
VCL-206ENST00000623461 ACTN2P35609 894 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms