RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LMTK3Q96Q04 1460 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 MATR3P43243 847 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 KRT85P78386 507 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 IMMTQ16891 758 aaKnown RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 ZNF444Q8N0Y2 327 aaPredicted RBP9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 TTC16Q8NEE8 873 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 SCLT1Q96NL6 688 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 TOPAZ1Q8N9V7 1692 aa9.64□□□□□ -0.87
PTPDC1-204ENST00000620992 MAP3K12Q12852 859 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 TPCN1Q9ULQ1 816 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 PXDNLA1KZ92 1463 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 KCNQ4P56696 695 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 CKAP2LQ8IYA6 745 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 CWC25Q9NXE8 425 aaPredicted RBP9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 A0A0D9SFI3 127 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 ZSCAN25Q6NSZ9 544 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
PTPDC1-204ENST00000620992 IFIT3O14879 490 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 ISM2Q6H9L7 571 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 CDC37L1Q7L3B6 337 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 FAM89AQ96GI7 184 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 VEZTQ9HBM0 779 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 SEPT11Q9NVA2 429 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 CCDC192P0DO97 292 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 FAM208AQ9UK61 1670 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 SLC27A2O14975 620 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 SASH1O94885 1247 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 GNPATO15228 680 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 SERPINC1P01008 464 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 CHST3Q7LGC8 479 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 TMEM87AQ8NBN3 555 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 ZNF408Q9H9D4 720 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 CTNNA3Q9UI47 895 aa9.62□□□□□ -0.87
PTPDC1-204ENST00000620992 SLC5A1P13866 664 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 PRKG1Q13976 671 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 TSC1Q92574 1164 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 NUP62CLQ9H1M0 184 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 AKAP2Q9Y2D5 859 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 ZNF213O14771 459 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 SPATA32Q96LK8 384 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 TSPY2A6NKD2 308 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 TERF1P54274 439 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 TNMDQ9H2S6 317 aa9.61□□□□□ -0.87
PTPDC1-204ENST00000620992 MTX1Q13505 466 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 MAP3K11Q16584 847 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 MIGA1Q8NAN2 632 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 TM6SF1Q9BZW5 370 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 ANKARQ7Z5J8 1434 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 DZIP3Q86Y13 1208 aaKnown RBP9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 IL17RAQ96F46 866 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 TAF6LQ9Y6J9 622 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 CACNA1FO60840 1977 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 A1BGP04217 495 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 IL2RBP14784 551 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 DNA2P51530 1060 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 ZNF589Q86UQ0 364 aaPredicted RBP9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 MAP4K1Q92918 833 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
PTPDC1-204ENST00000620992 DYNC1I1O14576 645 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 CDC5LQ99459 802 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 BIN1O00499 593 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 WWC2Q6AWC2 1192 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 CTCFLQ8NI51 663 aaPredicted RBP9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 NWD1Q149M9 1564 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 USP42Q9H9J4 1324 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 ST3GAL1Q11201 340 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 LUZP1Q86V48 1076 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 IQCA1Q86XH1 822 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 ZC3H12CQ9C0D7 883 aaKnown RBP9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 KAZALD1Q96I82 304 aa9.59□□□□□ -0.87
PTPDC1-204ENST00000620992 GOLGA8BA8MQT2 603 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 JAK2O60674 1132 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 IDEP14735 1019 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 RPS6KB1P23443 525 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 NOM1Q5C9Z4 860 aaKnown RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 ZNF396Q96N95 335 aaPredicted RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 CHGBP05060 677 aa9.58□□□□□ -0.88
PTPDC1-204ENST00000620992 IGKV5-2P06315 115 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms