RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 TMC6Q7Z403 805 aa18.77■□□□□ 0.59
DKC1-213ENST00000620277 SYNE4Q8N205 404 aa18.77■□□□□ 0.59
DKC1-213ENST00000620277 TDRD7Q8NHU6 1098 aaKnown RBP18.77■□□□□ 0.59
DKC1-213ENST00000620277 PCDHA7Q9UN72 937 aa18.77■□□□□ 0.59
DKC1-213ENST00000620277 TPM3P06753 285 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 ADORA1P30542 326 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 IQCB1Q15051 598 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 SPECC1Q5M775 1068 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 INCENPQ9NQS7 918 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 ST7Q9NRC1 585 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
DKC1-213ENST00000620277 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.59
DKC1-213ENST00000620277 ADD1P35611 737 aaKnown RBP18.76■□□□□ 0.59
DKC1-213ENST00000620277 RFX5P48382 616 aaPredicted RBP18.76■□□□□ 0.59
DKC1-213ENST00000620277 M0R2C6 588 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 ELF2Q15723 593 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 ANKLE2Q86XL3 938 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 IFNKQ9P0W0 207 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 A0A0U1RQG5 324 aaPredicted RBP18.75■□□□□ 0.59
DKC1-213ENST00000620277 UBE2Q2LH0YL09 131 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 CPLX1O14810 134 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 NALCNQ8IZF0 1738 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 KBTBD3Q8NAB2 608 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 PDIA3P30101 505 aaKnown RBP18.75■□□□□ 0.59
DKC1-213ENST00000620277 STX1AQ16623 288 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
DKC1-213ENST00000620277 MYL10Q9BUA6 226 aa18.75■□□□□ 0.59
DKC1-213ENST00000620277 KLF18A0A0U1RQI7 1052 aa18.74■□□□□ 0.59
DKC1-213ENST00000620277 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
DKC1-213ENST00000620277 SNRPA1P09661 255 aaKnown RBP18.74■□□□□ 0.59
DKC1-213ENST00000620277 SNW1Q13573 536 aaKnown RBP18.74■□□□□ 0.59
DKC1-213ENST00000620277 LRRN4CLQ8ND94 238 aa18.74■□□□□ 0.59
DKC1-213ENST00000620277 OSBP2Q969R2 916 aa18.74■□□□□ 0.59
DKC1-213ENST00000620277 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
DKC1-213ENST00000620277 HAUS7Q99871 368 aa18.74■□□□□ 0.59
DKC1-213ENST00000620277 COPRSQ9NQ92 184 aa18.74■□□□□ 0.59
DKC1-213ENST00000620277 GOLGA8BA8MQT2 603 aa18.73■□□□□ 0.59
DKC1-213ENST00000620277 TAF7LQ5H9L4 462 aa18.73■□□□□ 0.59
DKC1-213ENST00000620277 ERICH4A6NGS2 130 aa18.73■□□□□ 0.59
DKC1-213ENST00000620277 CYP27B1O15528 508 aa18.73■□□□□ 0.59
DKC1-213ENST00000620277 PHKG2P15735 406 aa18.73■□□□□ 0.59
DKC1-213ENST00000620277 GNL2Q13823 731 aaKnown RBP18.73■□□□□ 0.59
DKC1-213ENST00000620277 HOMER1Q86YM7 354 aa18.73■□□□□ 0.59
DKC1-213ENST00000620277 DHX40Q8IX18 779 aaKnown RBP18.73■□□□□ 0.59
DKC1-213ENST00000620277 SCARF1Q14162 830 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 ZSCAN16Q9H4T2 348 aaPredicted RBP18.72■□□□□ 0.59
DKC1-213ENST00000620277 ORC3Q9UBD5 711 aaPredicted RBP18.72■□□□□ 0.59
DKC1-213ENST00000620277 TOPAZ1Q8N9V7 1692 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 ATP1A3P13637 1013 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 SYT10Q6XYQ8 523 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 CEP57L1Q8IYX8 460 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 FAM89AQ96GI7 184 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 C8orf76Q96K31 380 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 XPO4Q9C0E2 1151 aaKnown RBP18.72■□□□□ 0.59
DKC1-213ENST00000620277 MAST3O60307 1309 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 PFKFB2O60825 505 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 FDPSP14324 419 aaKnown RBP18.72■□□□□ 0.59
DKC1-213ENST00000620277 DMTNQ08495 405 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 PHKBQ93100 1093 aa18.72■□□□□ 0.59
DKC1-213ENST00000620277 GPTP24298 496 aa18.71■□□□□ 0.59
DKC1-213ENST00000620277 NKX2-3Q8TAU0 364 aa18.71■□□□□ 0.59
DKC1-213ENST00000620277 CHMP4CQ96CF2 233 aa18.71■□□□□ 0.59
DKC1-213ENST00000620277 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
DKC1-213ENST00000620277 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 TOMM22Q9NS69 142 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 ANO10Q9NW15 660 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 ERBB3P21860 1342 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 NBPF26B4DH59 902 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 NBPF14Q5TI25 921 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
DKC1-213ENST00000620277 SYNE3Q6ZMZ3 975 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 ZNF396Q96N95 335 aaPredicted RBP18.7■□□□□ 0.58
DKC1-213ENST00000620277 RCOR1Q9UKL0 485 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 SNAP23O00161 211 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 ATG9AQ7Z3C6 839 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 ANKRD7Q92527 254 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 CLIC6Q96NY7 704 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 EPC1Q9H2F5 836 aa18.7■□□□□ 0.58
DKC1-213ENST00000620277 PRC1O43663 620 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
DKC1-213ENST00000620277 TTC39AQ5SRH9 613 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 MICU3Q86XE3 530 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 MRPS27Q92552 414 aaKnown RBP18.69■□□□□ 0.58
DKC1-213ENST00000620277 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 PUS7LQ9H0K6 701 aaKnown RBP18.69■□□□□ 0.58
DKC1-213ENST00000620277 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 ERCC6LQ2NKX8 1250 aa18.69■□□□□ 0.58
DKC1-213ENST00000620277 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
DKC1-213ENST00000620277 HELBQ8NG08 1087 aaPredicted RBP18.69■□□□□ 0.58
DKC1-213ENST00000620277 ZAP70P43403 619 aa18.68■□□□□ 0.58
DKC1-213ENST00000620277 SENP2Q9HC62 589 aa18.68■□□□□ 0.58
DKC1-213ENST00000620277 CACNA1FO60840 1977 aa18.68■□□□□ 0.58
DKC1-213ENST00000620277 FGAP02671 866 aa18.68■□□□□ 0.58
DKC1-213ENST00000620277 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
DKC1-213ENST00000620277 CTIFO43310 598 aaKnown RBP18.68■□□□□ 0.58
DKC1-213ENST00000620277 IDH1O75874 414 aaKnown RBP18.68■□□□□ 0.58
DKC1-213ENST00000620277 RALYLQ86SE5 291 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms