RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
PSMC3-213ENST00000619920 PROM2Q8N271 834 aa18.37■□□□□ 0.53
PSMC3-213ENST00000619920 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
PSMC3-213ENST00000619920 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.37■□□□□ 0.531e-12■■□□□ 13.5
PSMC3-213ENST00000619920 CWC22Q9HCG8 908 aaKnown RBP18.37■□□□□ 0.53
PSMC3-213ENST00000619920 ZSWIM6Q9HCJ5 1215 aa18.37■□□□□ 0.53
PSMC3-213ENST00000619920 PSMA5P28066 241 aa18.36■□□□□ 0.53
PSMC3-213ENST00000619920 TTC14Q96N46 770 aa18.36■□□□□ 0.53
PSMC3-213ENST00000619920 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
PSMC3-213ENST00000619920 DSCC1Q9BVC3 393 aa18.36■□□□□ 0.53
PSMC3-213ENST00000619920 RPS8P62241 208 aaKnown RBP18.35■□□□□ 0.53
PSMC3-213ENST00000619920 UBE4AQ14139 1066 aa18.35■□□□□ 0.53
PSMC3-213ENST00000619920 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
PSMC3-213ENST00000619920 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
PSMC3-213ENST00000619920 CHGBP05060 677 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 GYS1P13807 737 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CUL4AQ13619 759 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 KRT32Q14532 448 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 VPS53Q5VIR6 699 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CCDC129Q6ZRS4 1044 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 JAKMIP1Q96N16 626 aaKnown RBP18.34■□□□□ 0.53
PSMC3-213ENST00000619920 MINPP1Q9UNW1 487 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 RPAP1Q9BWH6 1393 aaPredicted RBP18.34■□□□□ 0.53
PSMC3-213ENST00000619920 MAST3O60307 1309 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 NPHP1O15259 732 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
PSMC3-213ENST00000619920 PI16Q6UXB8 463 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 APPBP2Q92624 585 aa18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
PSMC3-213ENST00000619920 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
PSMC3-213ENST00000619920 CASZ1Q86V15 1759 aa18.33■□□□□ 0.53
PSMC3-213ENST00000619920 TM4SF1P30408 202 aa18.33■□□□□ 0.52
PSMC3-213ENST00000619920 ADCK5Q3MIX3 580 aa18.33■□□□□ 0.52
PSMC3-213ENST00000619920 RUFY3Q7L099 469 aa18.33■□□□□ 0.52
PSMC3-213ENST00000619920 SPATA5Q8NB90 893 aa18.33■□□□□ 0.52
PSMC3-213ENST00000619920 ANKRD2Q9GZV1 360 aa18.33■□□□□ 0.52
PSMC3-213ENST00000619920 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
PSMC3-213ENST00000619920 COL4A1P02462 1669 aa18.32■□□□□ 0.52
PSMC3-213ENST00000619920 APBA3O96018 575 aa18.32■□□□□ 0.52
PSMC3-213ENST00000619920 UBE3CQ15386 1083 aa18.32■□□□□ 0.52
PSMC3-213ENST00000619920 OSBP2Q969R2 916 aa18.32■□□□□ 0.52
PSMC3-213ENST00000619920 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
PSMC3-213ENST00000619920 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
PSMC3-213ENST00000619920 M0R2C6 588 aa18.31■□□□□ 0.52
PSMC3-213ENST00000619920 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
PSMC3-213ENST00000619920 ADD2P35612 726 aa18.31■□□□□ 0.52
PSMC3-213ENST00000619920 AK2P54819 239 aa18.31■□□□□ 0.52
PSMC3-213ENST00000619920 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
PSMC3-213ENST00000619920 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
PSMC3-213ENST00000619920 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
PSMC3-213ENST00000619920 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
PSMC3-213ENST00000619920 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
PSMC3-213ENST00000619920 SNAP23O00161 211 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 HSPD1P10809 573 aaKnown RBP18.3■□□□□ 0.52
PSMC3-213ENST00000619920 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 SLFNL1Q499Z3 407 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 SERPINB2P05120 415 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 BCAMP50895 628 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 NUCB2P80303 420 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 BLOC1S2Q6QNY1 142 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
PSMC3-213ENST00000619920 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
PSMC3-213ENST00000619920 ST5P78524 1137 aa18.29■□□□□ 0.52
PSMC3-213ENST00000619920 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
PSMC3-213ENST00000619920 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
PSMC3-213ENST00000619920 FLAD1Q8NFF5 587 aa18.29■□□□□ 0.52
PSMC3-213ENST00000619920 ZSCAN31Q96LW9 406 aaPredicted RBP18.29■□□□□ 0.52
PSMC3-213ENST00000619920 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
PSMC3-213ENST00000619920 CYP21A2P08686 494 aa18.28■□□□□ 0.52
PSMC3-213ENST00000619920 MAP3K12Q12852 859 aa18.28■□□□□ 0.52
PSMC3-213ENST00000619920 GRAPQ13588 217 aa18.28■□□□□ 0.52
PSMC3-213ENST00000619920 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
PSMC3-213ENST00000619920 CAVIN4Q5BKX8 364 aa18.28■□□□□ 0.52
PSMC3-213ENST00000619920 GRAPLQ8TC17 118 aaPredicted RBP18.28■□□□□ 0.52
PSMC3-213ENST00000619920 MYH7P12883 1935 aa18.28■□□□□ 0.52
PSMC3-213ENST00000619920 ZBTB22O15209 634 aa18.27■□□□□ 0.52
PSMC3-213ENST00000619920 IDH1O75874 414 aaKnown RBP18.27■□□□□ 0.52
PSMC3-213ENST00000619920 PDE6AP16499 860 aa18.27■□□□□ 0.52
PSMC3-213ENST00000619920 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
PSMC3-213ENST00000619920 ZGPATQ8N5A5 531 aaKnown RBP18.27■□□□□ 0.52
PSMC3-213ENST00000619920 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
PSMC3-213ENST00000619920 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.52
PSMC3-213ENST00000619920 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.52
PSMC3-213ENST00000619920 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
PSMC3-213ENST00000619920 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
PSMC3-213ENST00000619920 TNRC6CQ9HCJ0 1690 aaKnown RBP18.27■□□□□ 0.52
PSMC3-213ENST00000619920 TAF1P21675 1872 aa18.26■□□□□ 0.51
PSMC3-213ENST00000619920 SEMA3EO15041 775 aa18.26■□□□□ 0.51
PSMC3-213ENST00000619920 HMGB1P09429 215 aaKnown RBP18.26■□□□□ 0.51
PSMC3-213ENST00000619920 CPA1P15085 419 aa18.26■□□□□ 0.51
PSMC3-213ENST00000619920 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
PSMC3-213ENST00000619920 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
PSMC3-213ENST00000619920 TNPO1Q92973 898 aaKnown RBP18.26■□□□□ 0.51
PSMC3-213ENST00000619920 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
PSMC3-213ENST00000619920 GPAA1O43292 621 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms