RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	RELT	Q969Z4	430 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ERP27	Q96DN0	273 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CEP89	Q96ST8	783 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	DUSP9	Q99956	384 aa	Known RBP	4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	BRMS1	Q9HCU9	246 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MAFF	Q9ULX9	164 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TNRC18	O15417	2968 aa	Predicted RBP	4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TRIM37	O94972	964 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HSP90AB1	P08238	724 aa	Known RBP	4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CCDC159	P0C7I6	412 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	POTEJ	P0CG39	1038 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PMFBP1	Q8TBY8	1022 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TAF4B	Q92750	862 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ARMC5	Q96C12	935 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SERINC2	Q96SA4	455 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PNN	Q9H307	717 aa	Known RBP	4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TCEAL9	Q9UHQ7	104 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TMEM94	Q12767	1356 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	BCL9	O00512	1426 aa		4.88	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CEP152	O94986	1710 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	EP400	Q96L91	3159 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CSB-PGBD3	P0DP91	1061 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MFSD4B	Q5TF39	518 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	JAZF1	Q86VZ6	243 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RELL1	Q8IUW5	271 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	BEGAIN	Q9BUH8	593 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	VRTN	Q9H8Y1	702 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TRPV5	Q9NQA5	729 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CGN	Q9P2M7	1197 aa	Known RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PGAP2	Q9UHJ9	254 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PIK3C2B	O00750	1634 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	IQGAP3	Q86VI3	1631 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LDHA	P00338	332 aa	Known RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PSMA3	P25788	255 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HSD3B2	P26439	372 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RBM5	P52756	815 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TRDN	Q13061	729 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HIC1	Q14526	733 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TMEM95	Q3KNT9	176 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SMYD5	Q6GMV2	418 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	METTL3	Q86U44	580 aa	Known RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ARHGEF25	Q86VW2	580 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	COMMD8	Q9NX08	183 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CLIC5	Q9NZA1	410 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ASAP1	Q9ULH1	1129 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TTF2	Q9UNY4	1162 aa	Known RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PPFIA2	O75334	1257 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RNASEH2A	O75792	299 aa	Known RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	S100B	P04271	92 aa	Predicted RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HOXA10	P31260	410 aa	Predicted RBP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SKAP1	Q86WV1	359 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PHC3	Q8NDX5	983 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TEKT1	Q969V4	418 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	APBA2	Q99767	749 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LGR6	Q9HBX8	967 aa		4.87	□□□□□ -1.63
UBE2D3-233	ENST00000618836	KIF27	Q86VH2	1401 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	KCNQ2	O43526	872 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TMED1	Q13445	227 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MYSM1	Q5VVJ2	828 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	BHMT	Q93088	406 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RNPC3	Q96LT9	517 aa	Known RBP	4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TINF2	Q9BSI4	451 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ZHX3	Q9H4I2	956 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	IFT57	Q9NWB7	429 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TOPAZ1	Q8N9V7	1692 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	DUOX2	Q9NRD8	1548 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CCDC163	A0A0D9SF12	145 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	FAM83G	A6ND36	823 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ESPN	B1AK53	854 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RRM1	P23921	792 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HOXC13	P31276	330 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ABL2	P42684	1182 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	NFE2L2	Q16236	605 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CTR9	Q6PD62	1173 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CHPF	Q8IZ52	775 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CLASRP	Q8N2M8	674 aa	Known RBP	4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MTMR14	Q8NCE2	650 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CCDC191	Q8NCU4	936 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CD248	Q9HCU0	757 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	POLG2	Q9UHN1	485 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	COL14A1	Q05707	1796 aa	Known RBP	4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MST1R	Q04912	1400 aa		4.86	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CCDC196	A0A1B0GTZ2	297 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MAP3K7	O43318	606 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RAD51AP2	Q09MP3	1159 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ASTL	Q6HA08	431 aa	Predicted RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	KCNV1	Q6PIU1	500 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PADI6	Q6TGC4	694 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CHCHD4	Q8N4Q1	142 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	NEK9	Q8TD19	979 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	DHX38	Q92620	1227 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms