RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ZHX3Q9H4I2 956 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 ADGRL1O94910 1474 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 ZBTB43O43298 467 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-212ENST00000617546 NBPF7P0C2Y1 421 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-212ENST00000617546 ATP6V1AP38606 617 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 SARNPP82979 210 aaKnown RBP11.65□□□□□ -0.54
CUL4A-212ENST00000617546 CPLX4Q7Z7G2 160 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 FAM71BQ8TC56 605 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 TNNQ9UQP3 1299 aa11.65□□□□□ -0.54
CUL4A-212ENST00000617546 GSTTP1A0A1W2PQM5 241 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 PTPDC1A2A3K4 754 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 WDHD1O75717 1129 aaPredicted RBP11.64□□□□□ -0.55
CUL4A-212ENST00000617546 ATP5DP30049 168 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 UBA7P41226 1012 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 NMIQ13287 307 aaPredicted RBP11.64□□□□□ -0.55
CUL4A-212ENST00000617546 C8orf58Q8NAV2 365 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 PUF60Q9UHX1 559 aaKnown RBP11.64□□□□□ -0.55
CUL4A-212ENST00000617546 TMCO5BA8MYB1 307 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 CCDC40Q4G0X9 1142 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 STXBP4Q6ZWJ1 553 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 NME9Q86XW9 330 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 MYD88Q99836 296 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 NUP58Q9BVL2 599 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
CUL4A-212ENST00000617546 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 TTC21AQ8NDW8 1320 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 SGSM2O43147 1006 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 CLUL1Q15846 466 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 CEP128Q6ZU80 1094 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 FBF1Q8TES7 1133 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 CCDC42Q96M95 316 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
CUL4A-212ENST00000617546 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 UQCRFS1P1P0C7P4 283 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 RUFY4Q6ZNE9 571 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 TRIM7Q9C029 511 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 KDM5CP41229 1560 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 PPFIA4O75335 1185 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 CCDC6Q16204 474 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 LMNTD2Q8IXW0 634 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 RHOXF2Q9BQY4 288 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 HELLSQ9NRZ9 838 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 MAP3K2Q9Y2U5 619 aa11.64□□□□□ -0.55
CUL4A-212ENST00000617546 KDM5BQ9UGL1 1544 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 PLXNC1O60486 1568 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 GOLGA8KD6RF30 607 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
CUL4A-212ENST00000617546 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
CUL4A-212ENST00000617546 APBA1Q02410 837 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 HOOK3Q86VS8 718 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 ADGBQ8N7X0 1667 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 CLEC17AQ6ZS10 378 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 SLC26A6Q9BXS9 759 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
CUL4A-212ENST00000617546 SLC5A1P13866 664 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 IGHMBP2P38935 993 aaKnown RBP11.63□□□□□ -0.55
CUL4A-212ENST00000617546 KARSQ15046 597 aaKnown RBP11.63□□□□□ -0.55
CUL4A-212ENST00000617546 LRRC8AQ8IWT6 810 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 LRRC45Q96CN5 670 aa11.63□□□□□ -0.55
CUL4A-212ENST00000617546 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 CUTAO60888 179 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 CALM1P0DP23 149 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 CALM2P0DP24 149 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 CALM3P0DP25 149 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 TSHZ3Q63HK5 1081 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 EFCAB13Q8IY85 973 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 RABGGTAQ92696 567 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 LZTFL1Q9NQ48 299 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 NUP153P49790 1475 aaKnown RBP11.62□□□□□ -0.55
CUL4A-212ENST00000617546 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 ETF1P62495 437 aaKnown RBP11.62□□□□□ -0.55
CUL4A-212ENST00000617546 KIAA1524Q8TCG1 905 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
CUL4A-212ENST00000617546 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.55
CUL4A-212ENST00000617546 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 A2MP01023 1474 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 ABCC4O15439 1325 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 NOP2P46087 812 aaKnown RBP11.62□□□□□ -0.55
CUL4A-212ENST00000617546 ATP11AP98196 1134 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
CUL4A-212ENST00000617546 DRC1Q96MC2 740 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 SYNMO15061 1565 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 ZNF521Q96K83 1311 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 GOLGA6BA6NDN3 693 aa11.62□□□□□ -0.55
CUL4A-212ENST00000617546 SLC8A1P32418 973 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms