RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 PDRG1Q9NUG6 133 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 CTSWP56202 376 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 GREM2Q9H772 168 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 CYP46A1Q9Y6A2 500 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 TAF6LQ9Y6J9 622 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 WDR33Q9C0J8 1336 aaKnown RBP12.4□□□□□ -0.42
LINC00598-207ENST00000616706 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
LINC00598-207ENST00000616706 CHGBP05060 677 aa12.39□□□□□ -0.43
LINC00598-207ENST00000616706 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
LINC00598-207ENST00000616706 KCNJ4P48050 445 aa12.39□□□□□ -0.43
LINC00598-207ENST00000616706 IFIT5Q13325 482 aaKnown RBP12.39□□□□□ -0.43
LINC00598-207ENST00000616706 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
LINC00598-207ENST00000616706 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
LINC00598-207ENST00000616706 PNPLA7Q6ZV29 1317 aa12.39□□□□□ -0.43
LINC00598-207ENST00000616706 MYO5AQ9Y4I1 1855 aaKnown RBP12.39□□□□□ -0.43
LINC00598-207ENST00000616706 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
LINC00598-207ENST00000616706 DNAJC2Q99543 621 aaKnown RBP12.39□□□□□ -0.43
LINC00598-207ENST00000616706 HAUS7Q99871 368 aa12.39□□□□□ -0.43
LINC00598-207ENST00000616706 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
LINC00598-207ENST00000616706 BCORQ6W2J9 1755 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 TAF5LO75529 589 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 ITGA6P23229 1130 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 TM4SF1P30408 202 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 ME3Q16798 604 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
LINC00598-207ENST00000616706 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
LINC00598-207ENST00000616706 CCDC83Q8IWF9 413 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 RRAGDQ9NQL2 400 aaPredicted RBP12.38□□□□□ -0.43
LINC00598-207ENST00000616706 AKAP11Q9UKA4 1901 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 ANKRD18BA2A2Z9 1011 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 DTNBO60941 627 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 SYT1P21579 422 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 LRRC24Q50LG9 513 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 MSL1Q68DK7 614 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
LINC00598-207ENST00000616706 CARMIL3Q8ND23 1372 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 STX6O43752 255 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 MBD3O95983 291 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 SERPINB2P05120 415 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
LINC00598-207ENST00000616706 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
LINC00598-207ENST00000616706 ZSCAN31Q96LW9 406 aaPredicted RBP12.37□□□□□ -0.43
LINC00598-207ENST00000616706 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
LINC00598-207ENST00000616706 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
LINC00598-207ENST00000616706 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 SH2B1Q9NRF2 756 aaPredicted RBP12.37□□□□□ -0.43
LINC00598-207ENST00000616706 TPCN1Q9ULQ1 816 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
LINC00598-207ENST00000616706 GJB2P29033 226 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 IL15P40933 162 aaPredicted RBP12.36□□□□□ -0.43
LINC00598-207ENST00000616706 CNBD1Q8NA66 436 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
LINC00598-207ENST00000616706 EYA2O00167 538 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 PSMA5P28066 241 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
LINC00598-207ENST00000616706 TIMM10P62072 90 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 DDR1Q08345 913 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00598-207ENST00000616706 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
LINC00598-207ENST00000616706 HMG20BQ9P0W2 317 aa12.36□□□□□ -0.43
LINC00598-207ENST00000616706 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
LINC00598-207ENST00000616706 GADD45BO75293 160 aaPredicted RBP12.35□□□□□ -0.43
LINC00598-207ENST00000616706 F13A1P00488 732 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 KBTBD3Q8NAB2 608 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
LINC00598-207ENST00000616706 SYCE3A1L190 88 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 CIAO1O76071 339 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 TOB2Q14106 344 aaPredicted RBP12.34□□□□□ -0.43
LINC00598-207ENST00000616706 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 RBSNQ9H1K0 784 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
LINC00598-207ENST00000616706 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 CNPY2Q9Y2B0 182 aa12.34□□□□□ -0.43
LINC00598-207ENST00000616706 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms