RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 CCDC173Q0VFZ6 552 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 MAPKAPK5Q8IW41 473 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PLEKHF1Q96S99 279 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 ANTXR1Q9H6X2 564 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 GREM2Q9H772 168 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 GPCPD1Q9NPB8 672 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 BMP2KQ9NSY1 1161 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 TRPM2O94759 1503 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PTPDC1A2A3K4 754 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 XRCC6P12956 609 aaKnown RBP eCLIP4.39□□□□□ -1.71
LTN1-207ENST00000614971 ARID5AQ03989 594 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 RTN1Q16799 776 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 DHX58Q96C10 678 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 SH2B1Q9NRF2 756 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 GADD45BO75293 160 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 BAG3O95817 575 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 CHGBP05060 677 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 UBA7P41226 1012 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PDE4BQ07343 736 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PTPN21Q16825 1174 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 TMC6Q7Z403 805 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PLBD2Q8NHP8 589 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 CRNKL1Q9BZJ0 848 aaKnown RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 SCAND2PQ9GZW5 306 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 SRP68Q9UHB9 627 aaKnown RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 ADGRL2O95490 1459 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 UQCRHLA0A096LP55 91 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 UQCRHP07919 91 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 TNNI2P48788 182 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 ANO6Q4KMQ2 910 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 CCDC183Q5T5S1 534 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 DRC1Q96MC2 740 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 CIZ1Q9ULV3 898 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 CCDC171Q6TFL3 1326 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 PLEKHG3A1L390 1219 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 TNNT3P45378 269 aaPredicted RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 TERF1P54274 439 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 CCDC178Q5BJE1 867 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 KCNJ14Q9UNX9 436 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 SHANK2Q9UPX8 1470 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 RNF113AO15541 343 aaKnown RBP4.39□□□□□ -1.71
LTN1-207ENST00000614971 MAEAQ7L5Y9 396 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 LUZP1Q86V48 1076 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 FCHSD1Q86WN1 690 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 OGFOD1Q8N543 542 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 HOMER2Q9NSB8 354 aa4.39□□□□□ -1.71
LTN1-207ENST00000614971 ERVK-7P63135 1459 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 USPL1Q5W0Q7 1092 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 KIAA0825Q8IV33 1275 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 ZFP91Q96JP5 570 aaPredicted RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 SNX14Q9Y5W7 946 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 KCNQ2O43526 872 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 LDHBP07195 334 aaKnown RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 TTF1Q15361 905 aaPredicted RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 ZNF174Q15697 407 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 ADCK5Q3MIX3 580 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 SIRT2Q8IXJ6 389 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 RNF41Q9H4P4 317 aaPredicted RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 KDM2BQ8NHM5 1336 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 ZNF532Q9HCE3 1301 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CCDC196A0A1B0GTZ2 297 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 SLC27A2O14975 620 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CALM1P0DP23 149 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CALM2P0DP24 149 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CALM3P0DP25 149 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 STIM1Q13586 685 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CABP5Q9NP86 173 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 COBLO75128 1261 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 URI1O94763 535 aaPredicted RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 PHKA1P46020 1223 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 NAPAP54920 295 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 GTF2IP78347 998 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 TGFBRAP1Q8WUH2 860 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 ESR2Q92731 530 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 BAZ2BQ9UIF8 2168 aaKnown RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 MYO1BO43795 1136 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 GOLGA8HP0CJ92 632 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 SFPQP23246 707 aaKnown RBP eCLIP4.38□□□□□ -1.71
LTN1-207ENST00000614971 SYKP43405 635 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 HMGN5P82970 282 aaKnown RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 TDRD12Q587J7 1177 aaKnown RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 ARHGEF25Q86VW2 580 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 RASEFQ8IZ41 740 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 AOPEPQ8N6M6 819 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 INCENPQ9NQS7 918 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 PARP3Q9Y6F1 533 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 MYO5CQ9NQX4 1742 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 F13A1P00488 732 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 SYCP1Q15431 976 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 FKBP15Q5T1M5 1219 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CDC37L1Q7L3B6 337 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 CCDC87Q9NVE4 849 aa4.38□□□□□ -1.71
LTN1-207ENST00000614971 ZNHIT6Q9NWK9 470 aaKnown RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 SCAF8Q9UPN6 1271 aaKnown RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 V9GY48 417 aaPredicted RBP4.38□□□□□ -1.71
LTN1-207ENST00000614971 PRDM15P57071 1507 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 CYP2D7A0A087X1C5 515 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms