RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PGBD1Q96JS3 809 aa16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
PCDHGA3-202ENST00000612467 H3BQV1 296 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 STARD3NLO95772 234 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 CCDC158Q5M9N0 1113 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 GIGYF2Q6Y7W6 1299 aaKnown RBP16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 C17orf53Q8N3J3 647 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 LEO1Q8WVC0 666 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 ADCY5O95622 1261 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 CYP19A1P11511 503 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 PDCP20941 246 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 MCAMP43121 646 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
PCDHGA3-202ENST00000612467 ITGB4P16144 1822 aa16.64■□□□□ 0.26
PCDHGA3-202ENST00000612467 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 RESTQ13127 1097 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 FAM184AQ8NB25 1140 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 KDM4AO75164 1064 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 CNNM1Q9NRU3 951 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.25
PCDHGA3-202ENST00000612467 A0A087WWV3 80 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 NR1I2O75469 434 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 CSF1RP07333 972 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 ATP2B3Q16720 1220 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 UBN2Q6ZU65 1347 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 FGAP02671 866 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 RIPOR2Q9Y4F9 1068 aa16.63■□□□□ 0.25
PCDHGA3-202ENST00000612467 PFKFB2O60825 505 aa16.62■□□□□ 0.25
PCDHGA3-202ENST00000612467 MYO5AQ9Y4I1 1855 aaKnown RBP16.62■□□□□ 0.25
PCDHGA3-202ENST00000612467 GOLGA6L4A6NEF3 574 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 INCENPQ9NQS7 918 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 NWD2Q9ULI1 1742 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 PHKA1P46020 1223 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 CTSWP56202 376 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 TRIM28Q13263 835 aaKnown RBP16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 NUP62CLQ9H1M0 184 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 PIH1D3Q9NQM4 214 aaKnown RBP16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 LUZP1Q86V48 1076 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 CCDC39Q9UFE4 941 aa16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 R3HCC1Q9Y3T6 440 aaKnown RBP16.61■□□□□ 0.25
PCDHGA3-202ENST00000612467 BCL9O00512 1426 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 GPAA1O43292 621 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 SPC24Q8NBT2 197 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 ERCC4Q92889 916 aaPredicted RBP16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 EXOC5O00471 708 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 RXRAP19793 462 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 SMIM5Q71RC9 77 aa16.6■□□□□ 0.25
PCDHGA3-202ENST00000612467 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 SLIT2O94813 1529 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 ANTXR2P58335 489 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 SLC9C2Q5TAH2 1124 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 WWC3Q9ULE0 1092 aa16.59■□□□□ 0.25
PCDHGA3-202ENST00000612467 KCNQ4P56696 695 aa16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 MAP3K11Q16584 847 aa16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 ILDR1Q86SU0 546 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 PKNOX2Q96KN3 472 aa16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 USP28Q96RU2 1077 aa16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 NBPF3Q9H094 633 aa16.58■□□□□ 0.25
PCDHGA3-202ENST00000612467 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 ELP1O95163 1332 aa16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 OFD1O75665 1012 aa16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 LETM1O95202 739 aaPredicted RBP16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 TYRO3Q06418 890 aa16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 SENP2Q9HC62 589 aa16.58■□□□□ 0.24
PCDHGA3-202ENST00000612467 PRC1O43663 620 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms