RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 ANKRD1Q15327 319 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 GTF2E1P29083 439 aaPredicted RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 MCAMP43121 646 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 TAF1LQ8IZX4 1826 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 MYH7P12883 1935 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 AKAP11Q9UKA4 1901 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 WASHC4Q2M389 1173 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
LINC01278-204ENST00000609143 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
LINC01278-204ENST00000609143 SLFNL1Q499Z3 407 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 APPBP2Q92624 585 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 QTRT2Q9H974 415 aaKnown RBP13.65□□□□□ -0.22
LINC01278-204ENST00000609143 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
LINC01278-204ENST00000609143 CYP21A2P08686 494 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 PHKA1P46020 1223 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
LINC01278-204ENST00000609143 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
LINC01278-204ENST00000609143 TAF6LQ9Y6J9 622 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 COL24A1Q17RW2 1714 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 M0R2C6 588 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 BRD1O95696 1058 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
LINC01278-204ENST00000609143 SLC10A5Q5PT55 438 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
LINC01278-204ENST00000609143 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
LINC01278-204ENST00000609143 SMIM5Q71RC9 77 aa13.63□□□□□ -0.23
LINC01278-204ENST00000609143 ANKRD18AQ8IVF6 992 aa13.63□□□□□ -0.23
LINC01278-204ENST00000609143 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
LINC01278-204ENST00000609143 NBPF5PQ86XG9 351 aaPredicted RBP13.63□□□□□ -0.23
LINC01278-204ENST00000609143 HMGB1P09429 215 aaKnown RBP13.62□□□□□ -0.23
LINC01278-204ENST00000609143 CHRNDQ07001 517 aa13.62□□□□□ -0.23
LINC01278-204ENST00000609143 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
LINC01278-204ENST00000609143 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
LINC01278-204ENST00000609143 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
LINC01278-204ENST00000609143 LARGE1O95461 756 aa13.62□□□□□ -0.23
LINC01278-204ENST00000609143 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
LINC01278-204ENST00000609143 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
LINC01278-204ENST00000609143 ME3Q16798 604 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 TRAPPC3LQ5T215 181 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 TPTE2Q6XPS3 522 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 TPCN1Q9ULQ1 816 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 RFC4P35249 363 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 ADD2P35612 726 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
LINC01278-204ENST00000609143 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
LINC01278-204ENST00000609143 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 UBE3CQ15386 1083 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 TCEANC2Q96MN5 208 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 NLRP3Q96P20 1036 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 C4AP0C0L4 1744 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 PUS7LQ9H0K6 701 aaKnown RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 ADRA2BP18089 450 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 RASGRF1Q13972 1273 aa13.6□□□□□ -0.23
LINC01278-204ENST00000609143 COL9A3Q14050 684 aaPredicted RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
LINC01278-204ENST00000609143 SNAP23O00161 211 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 GPAA1O43292 621 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 PHF14O94880 888 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 AMIGO3Q86WK7 504 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 GZF1Q9H116 711 aaPredicted RBP13.59□□□□□ -0.23
LINC01278-204ENST00000609143 PDE6AP16499 860 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 IMMTQ16891 758 aaKnown RBP13.59□□□□□ -0.23
LINC01278-204ENST00000609143 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
LINC01278-204ENST00000609143 KRT27Q7Z3Y8 459 aa13.59□□□□□ -0.23
LINC01278-204ENST00000609143 A0A1B0GUL6 1792 aa13.58□□□□□ -0.23
LINC01278-204ENST00000609143 COL4A1P02462 1669 aa13.58□□□□□ -0.23
LINC01278-204ENST00000609143 NPHP1O15259 732 aa13.58□□□□□ -0.24
LINC01278-204ENST00000609143 GJB2P29033 226 aa13.58□□□□□ -0.24
LINC01278-204ENST00000609143 FGD1P98174 961 aa13.58□□□□□ -0.24
LINC01278-204ENST00000609143 MAP3K12Q12852 859 aa13.58□□□□□ -0.24
LINC01278-204ENST00000609143 UBE4AQ14139 1066 aa13.58□□□□□ -0.24
LINC01278-204ENST00000609143 Q6ZUG5 572 aa13.58□□□□□ -0.24
LINC01278-204ENST00000609143 NECAB1Q8N987 351 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms