RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 MANSC4A6NHS7 340 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-220ENST00000608858 SOX1O00570 391 aaPredicted RBP12.27□□□□□ -0.45
CTCFL-220ENST00000608858 SASH1O94885 1247 aa12.27□□□□□ -0.45
CTCFL-220ENST00000608858 INHBEP58166 350 aa12.27□□□□□ -0.45
CTCFL-220ENST00000608858 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
CTCFL-220ENST00000608858 LDLRAD1Q5T700 205 aa12.27□□□□□ -0.45
CTCFL-220ENST00000608858 NBPF11Q86T75 865 aa12.27□□□□□ -0.45
CTCFL-220ENST00000608858 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
CTCFL-220ENST00000608858 PITPNM2Q9BZ72 1349 aa12.27□□□□□ -0.45
CTCFL-220ENST00000608858 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
CTCFL-220ENST00000608858 WNT10BO00744 389 aa12.26□□□□□ -0.45
CTCFL-220ENST00000608858 LRP10Q7Z4F1 713 aa12.26□□□□□ -0.45
CTCFL-220ENST00000608858 PTPN18Q99952 460 aa12.26□□□□□ -0.45
CTCFL-220ENST00000608858 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
CTCFL-220ENST00000608858 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
CTCFL-220ENST00000608858 USP17L3A6NCW0 530 aa12.25□□□□□ -0.45
CTCFL-220ENST00000608858 USP17L4A6NCW7 530 aa12.25□□□□□ -0.45
CTCFL-220ENST00000608858 HTATSF1O43719 755 aaKnown RBP12.25□□□□□ -0.45
CTCFL-220ENST00000608858 USP17L1Q7RTZ2 530 aa12.25□□□□□ -0.45
CTCFL-220ENST00000608858 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-220ENST00000608858 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
CTCFL-220ENST00000608858 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
CTCFL-220ENST00000608858 COL4A1P02462 1669 aa12.25□□□□□ -0.45
CTCFL-220ENST00000608858 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
CTCFL-220ENST00000608858 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
CTCFL-220ENST00000608858 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
CTCFL-220ENST00000608858 WNK4Q96J92 1243 aa12.24□□□□□ -0.45
CTCFL-220ENST00000608858 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
CTCFL-220ENST00000608858 GJA5P36382 358 aa12.23□□□□□ -0.45
CTCFL-220ENST00000608858 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
CTCFL-220ENST00000608858 HSP90AB3PQ58FF7 597 aa12.23□□□□□ -0.45
CTCFL-220ENST00000608858 OTUD7BQ6GQQ9 843 aa12.23□□□□□ -0.45
CTCFL-220ENST00000608858 OGFOD1Q8N543 542 aa12.23□□□□□ -0.45
CTCFL-220ENST00000608858 JARID2Q92833 1246 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-220ENST00000608858 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
CTCFL-220ENST00000608858 COL25A1Q9BXS0 654 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-220ENST00000608858 STAP2Q9UGK3 403 aa12.23□□□□□ -0.45
CTCFL-220ENST00000608858 MTFR1Q15390 333 aa12.22□□□□□ -0.45
CTCFL-220ENST00000608858 Q7L0L9 218 aa12.22□□□□□ -0.45
CTCFL-220ENST00000608858 ARHGAP39Q9C0H5 1083 aa12.22□□□□□ -0.45
CTCFL-220ENST00000608858 RBBP6Q7Z6E9 1792 aaKnown RBP12.22□□□□□ -0.45
CTCFL-220ENST00000608858 SPDYE2BA6NHP3 402 aa12.21□□□□□ -0.45
CTCFL-220ENST00000608858 SPDYE6P0CI01 402 aa12.21□□□□□ -0.45
CTCFL-220ENST00000608858 SPDYE2Q495Y8 402 aa12.21□□□□□ -0.45
CTCFL-220ENST00000608858 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
CTCFL-220ENST00000608858 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
CTCFL-220ENST00000608858 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
CTCFL-220ENST00000608858 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
CTCFL-220ENST00000608858 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
CTCFL-220ENST00000608858 KIAA0825Q8IV33 1275 aa12.2□□□□□ -0.46
CTCFL-220ENST00000608858 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
CTCFL-220ENST00000608858 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
CTCFL-220ENST00000608858 ZNF609O15014 1411 aa12.2□□□□□ -0.46
CTCFL-220ENST00000608858 ZBTB48P10074 688 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-220ENST00000608858 DACT2Q5SW24 774 aa12.19□□□□□ -0.46
CTCFL-220ENST00000608858 NBPF12Q5TAG4 269 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-220ENST00000608858 PODNQ7Z5L7 613 aa12.19□□□□□ -0.46
CTCFL-220ENST00000608858 DEFB123Q8N688 67 aa12.19□□□□□ -0.46
CTCFL-220ENST00000608858 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
CTCFL-220ENST00000608858 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
CTCFL-220ENST00000608858 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
CTCFL-220ENST00000608858 LRRC37AA6NMS7 1700 aa12.18□□□□□ -0.46
CTCFL-220ENST00000608858 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-220ENST00000608858 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
CTCFL-220ENST00000608858 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
CTCFL-220ENST00000608858 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
CTCFL-220ENST00000608858 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-220ENST00000608858 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
CTCFL-220ENST00000608858 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-220ENST00000608858 KRT24Q2M2I5 525 aa12.17□□□□□ -0.46
CTCFL-220ENST00000608858 APOBEC3FQ8IUX4 373 aaKnown RBP12.17□□□□□ -0.46
CTCFL-220ENST00000608858 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
CTCFL-220ENST00000608858 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
CTCFL-220ENST00000608858 ATP2B4P23634 1241 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 OPTNQ96CV9 577 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 ISCA1Q9BUE6 129 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 HTATIP2Q9BUP3 242 aa12.16□□□□□ -0.46
CTCFL-220ENST00000608858 BIN2Q9UBW5 565 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-220ENST00000608858 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
CTCFL-220ENST00000608858 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-220ENST00000608858 F8W031 263 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-220ENST00000608858 NEFMP07197 916 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 GTF2IP78347 998 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 FAM43AQ8N2R8 423 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 BRI3BPQ8WY22 251 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 VEZTQ9HBM0 779 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
CTCFL-220ENST00000608858 XDHP47989 1333 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 UNC80Q8N2C7 3258 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 EVI5O60447 810 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
CTCFL-220ENST00000608858 DLGAP5Q15398 846 aa12.14□□□□□ -0.47
CTCFL-220ENST00000608858 MAP3K11Q16584 847 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms