RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 VSIG8P0DPA2 414 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 HCLS1P14317 486 aaPredicted RBP6.98□□□□□ -1.29
TUBE1-209ENST00000604814 MSX1P28360 303 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 DHX8Q14562 1220 aaKnown RBP6.98□□□□□ -1.29
TUBE1-209ENST00000604814 RASA3Q14644 834 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 WDR78Q5VTH9 848 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 ANKS3Q6ZW76 656 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 TRIM22Q8IYM9 498 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 SENP7Q9BQF6 1050 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 TMX4Q9H1E5 349 aaPredicted RBP6.98□□□□□ -1.29
TUBE1-209ENST00000604814 ZNF232Q9UNY5 417 aa6.98□□□□□ -1.29
TUBE1-209ENST00000604814 KIF3BO15066 747 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 EPHA4P54764 986 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 DBN1Q16643 649 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 NBPF1Q3BBV0 1214 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 FOXR1Q6PIV2 292 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 GPR161Q8N6U8 529 aaKnown RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 GMCL1Q96IK5 515 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 PCGF6Q9BYE7 350 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 TSPAN10Q9H1Z9 355 aaPredicted RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 RUBCNLQ9H714 662 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 CHMP3Q9Y3E7 222 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 ESYT3A0FGR9 886 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 BDNFP23560 247 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 MASP1P48740 699 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 FOXK2Q01167 660 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 LMOD3Q0VAK6 560 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 HDAC1Q13547 482 aaPredicted RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 ALKBH2Q6NS38 261 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 KIAA0907Q7Z7F0 614 aaPredicted RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 HOMER1Q86YM7 354 aa6.97□□□□□ -1.29
TUBE1-209ENST00000604814 NUCKS1Q9H1E3 243 aaKnown RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 QTRT2Q9H974 415 aaKnown RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 FBXO9Q9UK97 447 aaPredicted RBP6.97□□□□□ -1.29
TUBE1-209ENST00000604814 TATP17735 454 aaPredicted RBP6.96□□□□□ -1.3
TUBE1-209ENST00000604814 AMOTL1Q8IY63 956 aa6.96□□□□□ -1.3
TUBE1-209ENST00000604814 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
TUBE1-209ENST00000604814 GTPBP3Q969Y2 492 aaKnown RBP6.96□□□□□ -1.3
TUBE1-209ENST00000604814 ZNF837Q96EG3 531 aaPredicted RBP6.96□□□□□ -1.3
TUBE1-209ENST00000604814 NAP1L4Q99733 375 aaKnown RBP6.96□□□□□ -1.3
TUBE1-209ENST00000604814 APBA2Q99767 749 aa6.96□□□□□ -1.3
TUBE1-209ENST00000604814 CFHR5Q9BXR6 569 aa6.96□□□□□ -1.3
TUBE1-209ENST00000604814 MRVI1Q9Y6F6 885 aa6.96□□□□□ -1.3
TUBE1-209ENST00000604814 SERTM1A2A2V5 107 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 CCER2I3L3R5 266 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 PPP1R12BO60237 982 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 CAND2O75155 1236 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 EIF4BP23588 611 aaKnown RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 NOS2P35228 1153 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 PDE6BP35913 854 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 ETFBP38117 255 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 RAB33AQ14088 237 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 TEAD4Q15561 434 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 EFHC2Q5JST6 749 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 SYCP2LQ5T4T6 812 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 FBF1Q8TES7 1133 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 CHMP7Q8WUX9 453 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 SCG3Q8WXD2 468 aaKnown RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 SAP130Q9H0E3 1048 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 FOXO3O43524 673 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 KRT18P05783 430 aaKnown RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 USP5P45974 858 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 PSMA6P60900 246 aaKnown RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 BRD3Q15059 726 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 PPP4R4Q6NUP7 873 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 BICDL1Q6ZP65 573 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 ZNF295-AS1Q8N0V1 137 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 RASGRP4Q8TDF6 673 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 SEC16BQ96JE7 1060 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 TRERF1Q96PN7 1200 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 COL25A1Q9BXS0 654 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-209ENST00000604814 SWAP70Q9UH65 585 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 SPG7Q9UQ90 795 aa6.95□□□□□ -1.3
TUBE1-209ENST00000604814 GPR25O00155 361 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 WIPF1O43516 503 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 BRDTQ58F21 947 aaPredicted RBP6.94□□□□□ -1.3
TUBE1-209ENST00000604814 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 LILRB2Q8N423 598 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 HNRNPLLQ8WVV9 542 aaKnown RBP6.94□□□□□ -1.3
TUBE1-209ENST00000604814 ZNF512BQ96KM6 892 aaPredicted RBP6.94□□□□□ -1.3
TUBE1-209ENST00000604814 CNTNAP3BQ96NU0 1288 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 CNTNAP3Q9BZ76 1288 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 CNTN3Q9P232 1028 aa6.94□□□□□ -1.3
TUBE1-209ENST00000604814 KLF4O43474 513 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 IGFBP4P22692 258 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 TXLNAP40222 546 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 NASPP49321 788 aaPredicted RBP6.93□□□□□ -1.3
TUBE1-209ENST00000604814 CDKN1CP49918 316 aaPredicted RBP6.93□□□□□ -1.3
TUBE1-209ENST00000604814 ZRSR2Q15696 482 aaKnown RBP6.93□□□□□ -1.3
TUBE1-209ENST00000604814 FAM43BQ6ZT52 329 aaPredicted RBP6.93□□□□□ -1.3
TUBE1-209ENST00000604814 FEZ1Q99689 392 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 ZDHHC3Q9NYG2 299 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 HCN4Q9Y3Q4 1203 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 GJA3Q9Y6H8 435 aa6.93□□□□□ -1.3
TUBE1-209ENST00000604814 IFRD1O00458 451 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms