RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
NEDD8-MDP1-203ENST00000604306 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
NEDD8-MDP1-203ENST00000604306 DDR1Q08345 913 aa14.83□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 SLC15A2Q16348 729 aa14.83□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 ZSCAN25Q6NSZ9 544 aa14.83□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CRAMP1Q96RY5 1269 aa14.83□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 STK32BQ9NY57 414 aa14.83□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 SEMA3EO15041 775 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 ADORA1P30542 326 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 HSPA4P34932 840 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CCDC102BQ68D86 513 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CWC27Q6UX04 472 aaKnown RBP14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 KCNB2Q92953 911 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 BRIP1Q9BX63 1249 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CCDC171Q6TFL3 1326 aa14.82□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CACNA1SQ13698 1873 aa14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 NMIQ13287 307 aaPredicted RBP14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 C15orf52Q6ZUT6 534 aaKnown RBP14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 RBM17Q96I25 401 aaKnown RBP14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.81□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CHD4Q14839 1912 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 GOLIM4O00461 696 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 BBOX1O75936 387 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 MCAMP43121 646 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 MCMDC2Q4G0Z9 681 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 ZMYM1Q5SVZ6 1142 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 GNL3LQ9NVN8 582 aaKnown RBP14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 LEMD3Q9Y2U8 911 aa14.8□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 A0A0D9SFI3 127 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 RNF113AO15541 343 aaKnown RBP14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 MCM2P49736 904 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 EZH2Q15910 746 aaKnown RBP14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 CAVIN4Q5BKX8 364 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 HSCBQ8IWL3 235 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 MAP4K1Q92918 833 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 IL25Q9H293 177 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 HMG20BQ9P0W2 317 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 PARP3Q9Y6F1 533 aa14.79□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 XDHP47989 1333 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 ST18O60284 1047 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 PDE6BP35913 854 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 PHKA1P46020 1223 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 EN1Q05925 392 aaPredicted RBP14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 RNF20Q5VTR2 975 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 SLC16A10Q8TF71 515 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 FAM227BQ96M60 508 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 TBC1D2Q9BYX2 928 aa14.78□□□□□ -0.04
NEDD8-MDP1-203ENST00000604306 TAF5LO75529 589 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ZAP70P43403 619 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 FKBP4Q02790 459 aaKnown RBP eCLIP14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 UBE3CQ15386 1083 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 TSGA10IPQ3SY00 556 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SPATA5Q8NB90 893 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 APPBP2Q92624 585 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 DSCC1Q9BVC3 393 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 TM6SF1Q9BZW5 370 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 IRS2Q9Y4H2 1338 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 MSH5O43196 834 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 MMP10P09238 476 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 NPR1P16066 1061 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 RASGRF1Q13972 1273 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SCARF1Q14162 830 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 NECTIN1Q15223 517 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 FBXO33Q7Z6M2 555 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 DENND2AQ9ULE3 1009 aa14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 CYP2E1P05181 493 aaPredicted RBP14.75□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ZKSCAN1P17029 563 aaPredicted RBP14.75□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ATP2B4P23634 1241 aa14.75□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ALDH1B1P30837 517 aa14.75□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ADD2P35612 726 aa14.75□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 KCNJ4P48050 445 aa14.75□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ZMYM6O95789 1325 aa14.74□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 K7ELQ4 463 aaPredicted RBP14.74□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SRGNP10124 158 aa14.74□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 MAP3K12Q12852 859 aa14.74□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 KRT32Q14532 448 aa14.74□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ANTXR1Q9H6X2 564 aa14.74□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 MAST3O60307 1309 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PTH1RQ03431 593 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 ZNF589Q86UQ0 364 aaPredicted RBP14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SP8Q8IXZ3 490 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 MASTLQ96GX5 879 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 FAM84BQ96KN1 310 aaPredicted RBP14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 SNX14Q9Y5W7 946 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 NDUFB9Q9Y6M9 179 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 C10orf71Q711Q0 1435 aa14.73□□□□□ -0.05
NEDD8-MDP1-203ENST00000604306 PSME4Q14997 1843 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms