RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 TOB2Q14106 344 aaPredicted RBP12.91□□□□□ -0.34
ZNF559-213ENST00000603380 CREB3L3Q68CJ9 461 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 FANCCQ00597 558 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 GOLGA8FQ08AF8 430 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 GOLGA8DPQ0D2H9 430 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 TRDNQ13061 729 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 FBXW10Q5XX13 1052 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 FAM107BQ9H098 131 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
ZNF559-213ENST00000603380 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 CASP8Q14790 479 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 HSD3B7Q9H2F3 369 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
ZNF559-213ENST00000603380 ARHGAP6O43182 974 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 C21orf2O43822 256 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 STK3Q13188 491 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 SSH3Q8TE77 659 aa12.9□□□□□ -0.34
ZNF559-213ENST00000603380 CUTAO60888 179 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 ANKRD1Q15327 319 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.35
ZNF559-213ENST00000603380 FMR1NBQ8N0W7 255 aaPredicted RBP12.9□□□□□ -0.35
ZNF559-213ENST00000603380 FSIP1Q8NA03 581 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 RUFY2Q8WXA3 655 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 CCDC102AQ96A19 550 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.35
ZNF559-213ENST00000603380 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.35
ZNF559-213ENST00000603380 NEDD4P46934 1319 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 ISM2Q6H9L7 571 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 DPF2Q92785 391 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
ZNF559-213ENST00000603380 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 GOLGA6L9A6NEM1 432 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
ZNF559-213ENST00000603380 ERLIN1O75477 346 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
ZNF559-213ENST00000603380 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
ZNF559-213ENST00000603380 SCP2P22307 547 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 PSMA5P28066 241 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 USP8P40818 1118 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 MCM10Q7L590 875 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
ZNF559-213ENST00000603380 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 SLC27A2O14975 620 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 RPS6KB1P23443 525 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.357e-6■■□□□ 11.5
ZNF559-213ENST00000603380 MAP4K1Q92918 833 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 ARHGEF10O15013 1369 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
ZNF559-213ENST00000603380 PRPF6O94906 941 aaKnown RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 ATP7BP35670 1465 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 H3BQV1 296 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 RNF40O75150 1001 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 VSNL1P62760 191 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 RNF217Q8TC41 542 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 TACO1Q9BSH4 297 aaKnown RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 FAM169AQ9Y6X4 670 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 SYF2O95926 243 aaKnown RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
ZNF559-213ENST00000603380 PUF60Q9UHX1 559 aaKnown RBP12.87□□□□□ -0.35
ZNF559-213ENST00000603380 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 AFAP1L1Q8TED9 768 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 GNL3LQ9NVN8 582 aaKnown RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 SHOX2O60902 331 aaPredicted RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 GPTP24298 496 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 UBASH3AP57075 661 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 POLA2Q14181 598 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
ZNF559-213ENST00000603380 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
ZNF559-213ENST00000603380 IRX2Q9BZI1 471 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms