RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
DDX49-211ENST00000601772 COL4A1P02462 1669 aa10.82□□□□□ -0.68
DDX49-211ENST00000601772 TRIM28Q13263 835 aaKnown RBP10.81□□□□□ -0.68
DDX49-211ENST00000601772 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
DDX49-211ENST00000601772 MPNDQ8N594 471 aa10.81□□□□□ -0.68
DDX49-211ENST00000601772 FAM89AQ96GI7 184 aa10.81□□□□□ -0.68
DDX49-211ENST00000601772 RBM17Q96I25 401 aaKnown RBP10.81□□□□□ -0.68
DDX49-211ENST00000601772 CRAMP1Q96RY5 1269 aa10.81□□□□□ -0.68
DDX49-211ENST00000601772 METTL22Q9BUU2 404 aaPredicted RBP10.81□□□□□ -0.68
DDX49-211ENST00000601772 MAP3K2Q9Y2U5 619 aa10.81□□□□□ -0.68
DDX49-211ENST00000601772 PI4KAP2A4QPH2 592 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 PPEF1O14829 653 aaPredicted RBP10.8□□□□□ -0.68
DDX49-211ENST00000601772 TNIP1Q15025 636 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
DDX49-211ENST00000601772 KSR2Q6VAB6 950 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 OTOP1Q7RTM1 612 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 PI4KAP1Q8N8J0 262 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 LRCH3Q96II8 777 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 R3HDMLQ9H3Y0 253 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 ABCC4O15439 1325 aa10.8□□□□□ -0.68
DDX49-211ENST00000601772 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
DDX49-211ENST00000601772 SOX1O00570 391 aaPredicted RBP10.79□□□□□ -0.68
DDX49-211ENST00000601772 FLIIQ13045 1269 aa10.79□□□□□ -0.68
DDX49-211ENST00000601772 NOM1Q5C9Z4 860 aaKnown RBP10.79□□□□□ -0.68
DDX49-211ENST00000601772 TRMT2AQ8IZ69 625 aaKnown RBP10.79□□□□□ -0.68
DDX49-211ENST00000601772 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
DDX49-211ENST00000601772 DPF3Q92784 378 aa10.79□□□□□ -0.68
DDX49-211ENST00000601772 CDCA5Q96FF9 252 aa10.79□□□□□ -0.68
DDX49-211ENST00000601772 CWC25Q9NXE8 425 aaPredicted RBP10.79□□□□□ -0.68
DDX49-211ENST00000601772 E9PSI1 815 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 IRS4O14654 1257 aaPredicted RBP10.78□□□□□ -0.68
DDX49-211ENST00000601772 EGFRP00533 1210 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 MYCP01106 439 aaPredicted RBP10.78□□□□□ -0.68
DDX49-211ENST00000601772 IGKV5-2P06315 115 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 FKBP5Q13451 457 aaPredicted RBP10.78□□□□□ -0.68
DDX49-211ENST00000601772 SLC4A8Q2Y0W8 1093 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 SULF1Q8IWU6 871 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 ZBTB38Q8NAP3 1195 aaPredicted RBP10.78□□□□□ -0.68
DDX49-211ENST00000601772 TMX4Q9H1E5 349 aaPredicted RBP10.78□□□□□ -0.68
DDX49-211ENST00000601772 PRDM6Q9NQX0 595 aa10.78□□□□□ -0.68
DDX49-211ENST00000601772 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
DDX49-211ENST00000601772 PCCAP05165 728 aaPredicted RBP10.77□□□□□ -0.69
DDX49-211ENST00000601772 SLFN5Q08AF3 891 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 NEXNQ0ZGT2 675 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 SF3B3Q15393 1217 aaKnown RBP10.77□□□□□ -0.69
DDX49-211ENST00000601772 CWF19L2Q2TBE0 894 aaKnown RBP10.77□□□□□ -0.69
DDX49-211ENST00000601772 DDX46Q7L014 1031 aaKnown RBP10.77□□□□□ -0.69
DDX49-211ENST00000601772 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
DDX49-211ENST00000601772 CDCA7LQ96GN5 454 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 CRBNQ96SW2 442 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 GGA3Q9NZ52 723 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
DDX49-211ENST00000601772 A0A1B0GUL6 1792 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 DUOX1Q9NRD9 1551 aa10.77□□□□□ -0.69
DDX49-211ENST00000601772 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 SREBF2Q12772 1141 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 GRAPQ13588 217 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 PDE3AQ14432 1141 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 NBR1Q14596 966 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 MOB2Q70IA6 237 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 GRAPLQ8TC17 118 aaPredicted RBP10.76□□□□□ -0.69
DDX49-211ENST00000601772 DNAAF4Q8WXU2 420 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 ARMC5Q96C12 935 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 ATP6V0A2Q9Y487 856 aa10.76□□□□□ -0.69
DDX49-211ENST00000601772 UBE2Q2LH0YL09 131 aa10.75□□□□□ -0.69
DDX49-211ENST00000601772 PDE8AO60658 829 aa10.75□□□□□ -0.69
DDX49-211ENST00000601772 BBOX1O75936 387 aa10.75□□□□□ -0.69
DDX49-211ENST00000601772 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
DDX49-211ENST00000601772 SP8Q8IXZ3 490 aa10.75□□□□□ -0.69
DDX49-211ENST00000601772 SUPT20HQ8NEM7 779 aa10.75□□□□□ -0.69
DDX49-211ENST00000601772 CELF1Q92879 486 aaKnown RBP10.75□□□□□ -0.69
DDX49-211ENST00000601772 F6X3S4 739 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 HSP90B1P14625 803 aaKnown RBP10.74□□□□□ -0.69
DDX49-211ENST00000601772 COL9A1P20849 921 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 TM4SF4P48230 202 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
DDX49-211ENST00000601772 KIF4BQ2VIQ3 1234 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 DEFB123Q8N688 67 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 CD99L2Q8TCZ2 262 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 VPS33BQ9H267 617 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 ASTN2O75129 1339 aaPredicted RBP10.74□□□□□ -0.69
DDX49-211ENST00000601772 PSME4Q14997 1843 aa10.74□□□□□ -0.69
DDX49-211ENST00000601772 YDJCA8MPS7 323 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 GCKRQ14397 625 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
DDX49-211ENST00000601772 Q7L0L9 218 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 UBE3BQ7Z3V4 1068 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
DDX49-211ENST00000601772 LINS1Q8NG48 757 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 ERO1AQ96HE7 468 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 ZNF333Q96JL9 665 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 CCDC85AQ96PX6 553 aaPredicted RBP10.73□□□□□ -0.69
DDX49-211ENST00000601772 SEC31BQ9NQW1 1179 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 LAMA3Q16787 3333 aa10.73□□□□□ -0.69
DDX49-211ENST00000601772 H7C1W4 665 aa10.72□□□□□ -0.69
DDX49-211ENST00000601772 PSMD14O00487 310 aa10.72□□□□□ -0.69
DDX49-211ENST00000601772 CTSWP56202 376 aa10.72□□□□□ -0.69
DDX49-211ENST00000601772 FKBP1BP68106 108 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms