RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 MCAMP43121 646 aa18.33■□□□□ 0.52
VRK3-218ENST00000600031 PI16Q6UXB8 463 aa18.33■□□□□ 0.52
VRK3-218ENST00000600031 ZNF512BQ96KM6 892 aaPredicted RBP18.33■□□□□ 0.52
VRK3-218ENST00000600031 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
VRK3-218ENST00000600031 KBTBD3Q8NAB2 608 aa18.32■□□□□ 0.52
VRK3-218ENST00000600031 RBM17Q96I25 401 aaKnown RBP18.32■□□□□ 0.52
VRK3-218ENST00000600031 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
VRK3-218ENST00000600031 AKAP11Q9UKA4 1901 aa18.32■□□□□ 0.52
VRK3-218ENST00000600031 HIP1O00291 1037 aa18.32■□□□□ 0.52
VRK3-218ENST00000600031 ZAP70P43403 619 aa18.32■□□□□ 0.52
VRK3-218ENST00000600031 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
VRK3-218ENST00000600031 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
VRK3-218ENST00000600031 CHGBP05060 677 aa18.31■□□□□ 0.52
VRK3-218ENST00000600031 ARID4AP29374 1257 aaPredicted RBP18.31■□□□□ 0.52
VRK3-218ENST00000600031 BCAMP50895 628 aa18.31■□□□□ 0.52
VRK3-218ENST00000600031 ANO2Q9NQ90 1003 aa18.31■□□□□ 0.52
VRK3-218ENST00000600031 RUFY2Q8WXA3 655 aa18.31■□□□□ 0.52
VRK3-218ENST00000600031 ANKRD2Q9GZV1 360 aa18.31■□□□□ 0.52
VRK3-218ENST00000600031 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
VRK3-218ENST00000600031 UQCRFS1P1P0C7P4 283 aa18.3■□□□□ 0.52
VRK3-218ENST00000600031 BRPF3Q9ULD4 1205 aa18.3■□□□□ 0.52
VRK3-218ENST00000600031 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
VRK3-218ENST00000600031 KIF2CQ99661 725 aa18.29■□□□□ 0.52
VRK3-218ENST00000600031 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
VRK3-218ENST00000600031 SRGNP10124 158 aa18.29■□□□□ 0.52
VRK3-218ENST00000600031 PDE6BP35913 854 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 GYG1P46976 350 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 BBOX1O75936 387 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
VRK3-218ENST00000600031 KLRK1P26718 216 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 KCNJ4P48050 445 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 RASGRF1Q13972 1273 aa18.28■□□□□ 0.52
VRK3-218ENST00000600031 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
VRK3-218ENST00000600031 CHMP5Q9NZZ3 219 aa18.27■□□□□ 0.52
VRK3-218ENST00000600031 ZNF804BA4D1E1 1349 aa18.27■□□□□ 0.51
VRK3-218ENST00000600031 NPR1P16066 1061 aa18.26■□□□□ 0.51
VRK3-218ENST00000600031 SPATA5Q8NB90 893 aa18.26■□□□□ 0.51
VRK3-218ENST00000600031 FAM84BQ96KN1 310 aaPredicted RBP18.26■□□□□ 0.51
VRK3-218ENST00000600031 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
VRK3-218ENST00000600031 COL11A2P13942 1736 aaPredicted RBP18.26■□□□□ 0.51
VRK3-218ENST00000600031 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
VRK3-218ENST00000600031 SEC62Q99442 399 aaKnown RBP18.26■□□□□ 0.51
VRK3-218ENST00000600031 GPSM2P81274 684 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 PTH1RQ03431 593 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 ZNF589Q86UQ0 364 aaPredicted RBP18.25■□□□□ 0.51
VRK3-218ENST00000600031 TICAM2Q86XR7 235 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 PIH1D3Q9NQM4 214 aaKnown RBP18.25■□□□□ 0.51
VRK3-218ENST00000600031 IQSEC3Q9UPP2 1182 aaPredicted RBP18.25■□□□□ 0.51
VRK3-218ENST00000600031 RAD50Q92878 1312 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 CAVIN4Q5BKX8 364 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 FBXO33Q7Z6M2 555 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
VRK3-218ENST00000600031 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
VRK3-218ENST00000600031 XDHP47989 1333 aa18.24■□□□□ 0.51
VRK3-218ENST00000600031 IRS2Q9Y4H2 1338 aa18.24■□□□□ 0.51
VRK3-218ENST00000600031 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
VRK3-218ENST00000600031 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
VRK3-218ENST00000600031 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
VRK3-218ENST00000600031 TXNRD3Q86VQ6 643 aa18.24■□□□□ 0.51
VRK3-218ENST00000600031 SLC16A10Q8TF71 515 aa18.24■□□□□ 0.51
VRK3-218ENST00000600031 MASTLQ96GX5 879 aa18.24■□□□□ 0.51
VRK3-218ENST00000600031 MYO5AQ9Y4I1 1855 aaKnown RBP18.24■□□□□ 0.51
VRK3-218ENST00000600031 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
VRK3-218ENST00000600031 TTF1Q15361 905 aaPredicted RBP18.23■□□□□ 0.51
VRK3-218ENST00000600031 ZMYM1Q5SVZ6 1142 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
VRK3-218ENST00000600031 NSFL1CQ9UNZ2 370 aaKnown RBP18.23■□□□□ 0.51
VRK3-218ENST00000600031 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 VPS37DQ86XT2 251 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 SNX21Q969T3 373 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 PALD1Q9ULE6 856 aa18.23■□□□□ 0.51
VRK3-218ENST00000600031 SP8Q8IXZ3 490 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 GNL3LQ9NVN8 582 aaKnown RBP18.22■□□□□ 0.51
VRK3-218ENST00000600031 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 ALDH1B1P30837 517 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
VRK3-218ENST00000600031 MCM4P33991 863 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 HSPA4P34932 840 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 ZNF622Q969S3 477 aaKnown RBP eCLIP18.22■□□□□ 0.51
VRK3-218ENST00000600031 GPR101Q96P66 508 aaPredicted RBP18.22■□□□□ 0.51
VRK3-218ENST00000600031 HELLSQ9NRZ9 838 aa18.22■□□□□ 0.51
VRK3-218ENST00000600031 H0YIN7 160 aa18.21■□□□□ 0.51
VRK3-218ENST00000600031 MCCP23508 829 aa18.21■□□□□ 0.51
VRK3-218ENST00000600031 LRRFIP1Q32MZ4 808 aaKnown RBP18.21■□□□□ 0.51
VRK3-218ENST00000600031 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
VRK3-218ENST00000600031 COL1A1P02452 1464 aaPredicted RBP18.21■□□□□ 0.51
VRK3-218ENST00000600031 MYH7P12883 1935 aa18.21■□□□□ 0.51
VRK3-218ENST00000600031 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
VRK3-218ENST00000600031 ZFYP08048 801 aaPredicted RBP18.2■□□□□ 0.5
VRK3-218ENST00000600031 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 CHRNA5P30532 468 aa18.2■□□□□ 0.5
VRK3-218ENST00000600031 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms