RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 PPM1GO15355 546 aaPredicted RBP13.74□□□□□ -0.21
SMG9-207ENST00000598860 TRAF7Q6Q0C0 670 aa13.74□□□□□ -0.21
SMG9-207ENST00000598860 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
SMG9-207ENST00000598860 AAASQ9NRG9 546 aa13.74□□□□□ -0.21
SMG9-207ENST00000598860 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
SMG9-207ENST00000598860 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
SMG9-207ENST00000598860 PCDHB11Q9Y5F2 797 aa13.74□□□□□ -0.21
SMG9-207ENST00000598860 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
SMG9-207ENST00000598860 CRIPAKQ8N1N5 446 aa13.73□□□□□ -0.21
SMG9-207ENST00000598860 ZNF784Q8NCA9 323 aaPredicted RBP13.73□□□□□ -0.21
SMG9-207ENST00000598860 GZF1Q9H116 711 aaPredicted RBP13.73□□□□□ -0.21
SMG9-207ENST00000598860 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
SMG9-207ENST00000598860 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
SMG9-207ENST00000598860 LCE2BO14633 110 aa13.72□□□□□ -0.21
SMG9-207ENST00000598860 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
SMG9-207ENST00000598860 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
SMG9-207ENST00000598860 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
SMG9-207ENST00000598860 STK32AQ8WU08 396 aa13.72□□□□□ -0.21
SMG9-207ENST00000598860 NOVA2Q9UNW9 492 aaKnown RBP13.72□□□□□ -0.21
SMG9-207ENST00000598860 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L15C9J2P7 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L10C9JJH3 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L12C9JPN9 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L11C9JVI0 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L21D6R901 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L18D6R9N7 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L22D6RA61 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L19D6RCP7 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L20D6RJB6 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.21
SMG9-207ENST00000598860 USP17L24Q0WX57 530 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMG9-207ENST00000598860 EZH2Q15910 746 aaKnown RBP13.71□□□□□ -0.21
SMG9-207ENST00000598860 MAP7D1Q3KQU3 841 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 TMEM164Q5U3C3 297 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 CAMKK2Q96RR4 588 aa13.71□□□□□ -0.21
SMG9-207ENST00000598860 LRRC37A3O60309 1634 aa13.71□□□□□ -0.22
SMG9-207ENST00000598860 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
SMG9-207ENST00000598860 CRTC2Q53ET0 693 aaPredicted RBP13.7□□□□□ -0.22
SMG9-207ENST00000598860 CYLDQ9NQC7 956 aa13.7□□□□□ -0.22
SMG9-207ENST00000598860 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
SMG9-207ENST00000598860 CBLBQ13191 982 aa13.69□□□□□ -0.22
SMG9-207ENST00000598860 EML3Q32P44 896 aa13.69□□□□□ -0.22
SMG9-207ENST00000598860 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
SMG9-207ENST00000598860 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
SMG9-207ENST00000598860 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
SMG9-207ENST00000598860 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
SMG9-207ENST00000598860 BCL9O00512 1426 aa13.68□□□□□ -0.22
SMG9-207ENST00000598860 RASA1P20936 1047 aa13.68□□□□□ -0.22
SMG9-207ENST00000598860 IL13P35225 146 aa13.68□□□□□ -0.22
SMG9-207ENST00000598860 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
SMG9-207ENST00000598860 DDX54Q8TDD1 881 aaKnown RBP13.68□□□□□ -0.22
SMG9-207ENST00000598860 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
SMG9-207ENST00000598860 DACH1Q9UI36 760 aa13.68□□□□□ -0.22
SMG9-207ENST00000598860 DOLKQ9UPQ8 538 aa13.68□□□□□ -0.22
SMG9-207ENST00000598860 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 LILRA1O75019 489 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 PTK7Q13308 1070 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 TMCO4Q5TGY1 634 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
SMG9-207ENST00000598860 SBF2Q86WG5 1849 aa13.67□□□□□ -0.22
SMG9-207ENST00000598860 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
SMG9-207ENST00000598860 PLSCR1O15162 318 aa13.66□□□□□ -0.22
SMG9-207ENST00000598860 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
SMG9-207ENST00000598860 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
SMG9-207ENST00000598860 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
SMG9-207ENST00000598860 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
SMG9-207ENST00000598860 DLG5Q8TDM6 1919 aa13.66□□□□□ -0.22
SMG9-207ENST00000598860 VIRMAQ69YN4 1812 aaKnown RBP13.65□□□□□ -0.22
SMG9-207ENST00000598860 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
SMG9-207ENST00000598860 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
SMG9-207ENST00000598860 BMP1P13497 986 aa13.65□□□□□ -0.22
SMG9-207ENST00000598860 TATP17735 454 aaPredicted RBP13.65□□□□□ -0.22
SMG9-207ENST00000598860 SCTRP47872 440 aa13.65□□□□□ -0.22
SMG9-207ENST00000598860 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMG9-207ENST00000598860 OXLD1Q5BKU9 147 aa13.65□□□□□ -0.22
SMG9-207ENST00000598860 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
SMG9-207ENST00000598860 KDRP35968 1356 aa13.65□□□□□ -0.22
SMG9-207ENST00000598860 KCNQ2O43526 872 aa13.64□□□□□ -0.23
SMG9-207ENST00000598860 ERVK-9P63128 1117 aa13.64□□□□□ -0.23
SMG9-207ENST00000598860 Q6ZVU0 165 aa13.64□□□□□ -0.23
SMG9-207ENST00000598860 MEIOBQ8N635 442 aa13.64□□□□□ -0.23
SMG9-207ENST00000598860 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
SMG9-207ENST00000598860 NEFMP07197 916 aa13.63□□□□□ -0.23
SMG9-207ENST00000598860 B4GALNT3Q6L9W6 998 aa13.63□□□□□ -0.23
SMG9-207ENST00000598860 FAM9BQ8IZU0 186 aa13.63□□□□□ -0.23
SMG9-207ENST00000598860 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
SMG9-207ENST00000598860 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
SMG9-207ENST00000598860 R3HDM1Q15032 1099 aaKnown RBP13.62□□□□□ -0.23
SMG9-207ENST00000598860 MRPL14Q6P1L8 145 aaKnown RBP13.62□□□□□ -0.23
SMG9-207ENST00000598860 TRIM46Q7Z4K8 759 aa13.62□□□□□ -0.23
SMG9-207ENST00000598860 TRIM50Q86XT4 487 aa13.62□□□□□ -0.23
SMG9-207ENST00000598860 ATP13A2Q9NQ11 1180 aa13.62□□□□□ -0.23
SMG9-207ENST00000598860 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
SMG9-207ENST00000598860 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms