RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 E7EWF7 191 aa19.37■□□□□ 0.69
LIG1-206ENST00000594067 EXOSC10Q01780 885 aaKnown RBP19.37■□□□□ 0.69
LIG1-206ENST00000594067 PLA2G4DQ86XP0 818 aa19.37■□□□□ 0.69
LIG1-206ENST00000594067 HSPD1P10809 573 aaKnown RBP19.37■□□□□ 0.69
LIG1-206ENST00000594067 ATF3P18847 181 aa19.37■□□□□ 0.69
LIG1-206ENST00000594067 GUCY1B3Q02153 619 aa19.37■□□□□ 0.69
LIG1-206ENST00000594067 SPDYE4A6NLX3 237 aa19.36■□□□□ 0.69
LIG1-206ENST00000594067 A1BGP04217 495 aa19.36■□□□□ 0.69
LIG1-206ENST00000594067 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
LIG1-206ENST00000594067 NAA16Q6N069 864 aaPredicted RBP19.36■□□□□ 0.69
LIG1-206ENST00000594067 CCAR1Q8IX12 1150 aaKnown RBP19.36■□□□□ 0.69
LIG1-206ENST00000594067 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
LIG1-206ENST00000594067 IL15P40933 162 aaPredicted RBP19.36■□□□□ 0.69
LIG1-206ENST00000594067 GOLPH3LQ9H4A5 285 aa19.36■□□□□ 0.69
LIG1-206ENST00000594067 U2AF2P26368 475 aaKnown RBP eCLIP19.35■□□□□ 0.69
LIG1-206ENST00000594067 TTLL5Q6EMB2 1281 aa19.35■□□□□ 0.69
LIG1-206ENST00000594067 USP28Q96RU2 1077 aa19.35■□□□□ 0.69
LIG1-206ENST00000594067 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
LIG1-206ENST00000594067 MAST3O60307 1309 aa19.35■□□□□ 0.69
LIG1-206ENST00000594067 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
LIG1-206ENST00000594067 GTPBP4Q9BZE4 634 aaKnown RBP19.35■□□□□ 0.69
LIG1-206ENST00000594067 A0A1B0GUL7 405 aa19.34■□□□□ 0.69
LIG1-206ENST00000594067 EYA2O00167 538 aa19.34■□□□□ 0.69
LIG1-206ENST00000594067 ZSCAN25Q6NSZ9 544 aa19.34■□□□□ 0.69
LIG1-206ENST00000594067 C11orf57Q6ZUT1 292 aaPredicted RBP19.34■□□□□ 0.69
LIG1-206ENST00000594067 GPR108Q9NPR9 543 aa19.34■□□□□ 0.69
LIG1-206ENST00000594067 RNF113AO15541 343 aaKnown RBP19.34■□□□□ 0.69
LIG1-206ENST00000594067 AGXT2Q9BYV1 514 aa19.34■□□□□ 0.69
LIG1-206ENST00000594067 A0A087WWV3 80 aa19.33■□□□□ 0.69
LIG1-206ENST00000594067 M0R2C6 588 aa19.33■□□□□ 0.69
LIG1-206ENST00000594067 PDIA3P30101 505 aaKnown RBP19.33■□□□□ 0.69
LIG1-206ENST00000594067 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.69
LIG1-206ENST00000594067 NCBP1Q09161 790 aaKnown RBP19.33■□□□□ 0.68
LIG1-206ENST00000594067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.33■□□□□ 0.68
LIG1-206ENST00000594067 C16orf45Q96MC5 204 aaPredicted RBP19.33■□□□□ 0.68
LIG1-206ENST00000594067 COL18A1P39060 1754 aa19.33■□□□□ 0.68
LIG1-206ENST00000594067 GPHNQ9NQX3 736 aaPredicted RBP19.32■□□□□ 0.68
LIG1-206ENST00000594067 IQCB1Q15051 598 aa19.32■□□□□ 0.68
LIG1-206ENST00000594067 GLI3P10071 1580 aa19.32■□□□□ 0.68
LIG1-206ENST00000594067 GOLGA6L19H0YKK7 550 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
LIG1-206ENST00000594067 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 CCDC73Q6ZRK6 1079 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 CCDC144CPQ8IYA2 1237 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 OSBP2Q969R2 916 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 SALL1Q9NSC2 1324 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
LIG1-206ENST00000594067 ILDR1Q86SU0 546 aaPredicted RBP19.31■□□□□ 0.68
LIG1-206ENST00000594067 ZNF396Q96N95 335 aaPredicted RBP19.31■□□□□ 0.68
LIG1-206ENST00000594067 LAMA4Q16363 1823 aa19.31■□□□□ 0.68
LIG1-206ENST00000594067 SMTNL1A8MU46 457 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 TNNT1P13805 278 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 ME1P48163 572 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 CACTINQ8WUQ7 758 aaKnown RBP19.3■□□□□ 0.68
LIG1-206ENST00000594067 HAND2P61296 217 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 SYCP1Q15431 976 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 STX1AQ16623 288 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 FSIP1Q8NA03 581 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 ZNF274Q96GC6 653 aaPredicted RBP19.3■□□□□ 0.68
LIG1-206ENST00000594067 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
LIG1-206ENST00000594067 CTAGE5O15320 804 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 CAVIN2O95810 425 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
LIG1-206ENST00000594067 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
LIG1-206ENST00000594067 FDPSP14324 419 aaKnown RBP19.29■□□□□ 0.68
LIG1-206ENST00000594067 OTUD7BQ6GQQ9 843 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 CCDC85AQ96PX6 553 aaPredicted RBP19.29■□□□□ 0.68
LIG1-206ENST00000594067 FEZ1Q99689 392 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 CARMIL3Q8ND23 1372 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 ABCC6O95255 1503 aa19.29■□□□□ 0.68
LIG1-206ENST00000594067 ADORA1P30542 326 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 ENGASEQ8NFI3 743 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 FBXW7Q969H0 707 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 ZCRB1Q8TBF4 217 aaKnown RBP19.28■□□□□ 0.68
LIG1-206ENST00000594067 FAM160A1Q05DH4 1040 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 GORABQ5T7V8 394 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 ZNF330Q9Y3S2 320 aaPredicted RBP19.28■□□□□ 0.68
LIG1-206ENST00000594067 PAXBP1Q9Y5B6 917 aa19.28■□□□□ 0.68
LIG1-206ENST00000594067 PKD1L3Q7Z443 1732 aa19.27■□□□□ 0.68
LIG1-206ENST00000594067 TNS3Q68CZ2 1445 aa19.27■□□□□ 0.68
LIG1-206ENST00000594067 BECN2A8MW95 431 aa19.27■□□□□ 0.68
LIG1-206ENST00000594067 CIAO1O76071 339 aa19.27■□□□□ 0.68
LIG1-206ENST00000594067 TTC39AQ5SRH9 613 aa19.27■□□□□ 0.68
LIG1-206ENST00000594067 ADAMTSL3P82987 1691 aa19.27■□□□□ 0.68
LIG1-206ENST00000594067 CDC25BP30305 580 aa19.27■□□□□ 0.67
LIG1-206ENST00000594067 ARID5BQ14865 1188 aa19.27■□□□□ 0.67
LIG1-206ENST00000594067 RAB11FIP4Q86YS3 637 aa19.27■□□□□ 0.67
LIG1-206ENST00000594067 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.67
LIG1-206ENST00000594067 KIF20AO95235 890 aa19.26■□□□□ 0.67
LIG1-206ENST00000594067 NAA30Q147X3 362 aaPredicted RBP19.26■□□□□ 0.67
LIG1-206ENST00000594067 CCDC158Q5M9N0 1113 aa19.26■□□□□ 0.67
LIG1-206ENST00000594067 ATL3Q6DD88 541 aa19.26■□□□□ 0.67
LIG1-206ENST00000594067 SARM1Q6SZW1 724 aa19.26■□□□□ 0.67
LIG1-206ENST00000594067 CTNNA3Q9UI47 895 aa19.26■□□□□ 0.67
LIG1-206ENST00000594067 PCDHA7Q9UN72 937 aa19.26■□□□□ 0.67
LIG1-206ENST00000594067 FOXP2O15409 715 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms