RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ZSWIM6Q9HCJ5 1215 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 CYP46A1Q9Y6A2 500 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 PHF14O94880 888 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 PSMA5P28066 241 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 ARID4AP29374 1257 aaPredicted RBP14.3□□□□□ -0.12
NPC1-214ENST00000593280 RFC4P35249 363 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 MCAMP43121 646 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 SLC10A5Q5PT55 438 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 TRAPPC3LQ5T215 181 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 ZGPATQ8N5A5 531 aaKnown RBP14.3□□□□□ -0.12
NPC1-214ENST00000593280 TNPO1Q92973 898 aaKnown RBP14.3□□□□□ -0.12
NPC1-214ENST00000593280 TAF1P21675 1872 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 MAST3O60307 1309 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 ADRA2BP18089 450 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 MCM4P33991 863 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 AK2P54819 239 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 NUCB2P80303 420 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 TTF1Q15361 905 aaPredicted RBP14.29□□□□□ -0.12
NPC1-214ENST00000593280 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 CCDC102BQ68D86 513 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 PI16Q6UXB8 463 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 C3orf67Q6ZVT6 689 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 RUFY3Q7L099 469 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 ANKRD18AQ8IVF6 992 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 INTS4Q96HW7 963 aaKnown RBP14.29□□□□□ -0.12
NPC1-214ENST00000593280 GBP4Q96PP9 640 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 PDRG1Q9NUG6 133 aa14.29□□□□□ -0.12
NPC1-214ENST00000593280 DOCK2Q92608 1830 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 TNRC6CQ9HCJ0 1690 aaKnown RBP14.28□□□□□ -0.12
NPC1-214ENST00000593280 CPA1P15085 419 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 PHKA1P46020 1223 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 KRT32Q14532 448 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 SLFNL1Q499Z3 407 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 SLC27A3Q5K4L6 730 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 DSCC1Q9BVC3 393 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.12
NPC1-214ENST00000593280 LIMCH1Q9UPQ0 1083 aa14.28□□□□□ -0.12
NPC1-214ENST00000593280 CARMIL3Q8ND23 1372 aa14.27□□□□□ -0.12
NPC1-214ENST00000593280 M0R2C6 588 aa14.27□□□□□ -0.12
NPC1-214ENST00000593280 CHRNDQ07001 517 aa14.27□□□□□ -0.12
NPC1-214ENST00000593280 ZSCAN25Q6NSZ9 544 aa14.27□□□□□ -0.12
NPC1-214ENST00000593280 TPTE2Q6XPS3 522 aa14.27□□□□□ -0.12
NPC1-214ENST00000593280 MYO5AQ9Y4I1 1855 aaKnown RBP14.27□□□□□ -0.12
NPC1-214ENST00000593280 DDX11L8A8MPP1 907 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 TRIM37O94972 964 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 WASHC4Q2M389 1173 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 BLOC1S2Q6QNY1 142 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 APPBP2Q92624 585 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 NLRP3Q96P20 1036 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 LAMA4Q16363 1823 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 NPHP1O15259 732 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 CYP2E1P05181 493 aaPredicted RBP14.26□□□□□ -0.13
NPC1-214ENST00000593280 RBM6P78332 1123 aaKnown RBP14.26□□□□□ -0.13
NPC1-214ENST00000593280 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
NPC1-214ENST00000593280 BSDC1Q9NW68 430 aaPredicted RBP14.26□□□□□ -0.13
NPC1-214ENST00000593280 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
NPC1-214ENST00000593280 RPS6KB1P23443 525 aa14.25□□□□□ -0.13
NPC1-214ENST00000593280 RXRBP28702 533 aa14.25□□□□□ -0.13
NPC1-214ENST00000593280 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
NPC1-214ENST00000593280 PIH1D3Q9NQM4 214 aaKnown RBP14.25□□□□□ -0.13
NPC1-214ENST00000593280 TAF6LQ9Y6J9 622 aa14.25□□□□□ -0.13
NPC1-214ENST00000593280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.24□□□□□ -0.13
NPC1-214ENST00000593280 SNAP23O00161 211 aa14.24□□□□□ -0.13
NPC1-214ENST00000593280 CYP21A2P08686 494 aa14.24□□□□□ -0.13
NPC1-214ENST00000593280 SPATA5Q8NB90 893 aa14.24□□□□□ -0.13
NPC1-214ENST00000593280 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
NPC1-214ENST00000593280 IDH1O75874 414 aaKnown RBP14.23□□□□□ -0.13
NPC1-214ENST00000593280 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
NPC1-214ENST00000593280 ADD2P35612 726 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 RASGRF1Q13972 1273 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 NFIXQ14938 502 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 ANKRD1Q15327 319 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
NPC1-214ENST00000593280 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
NPC1-214ENST00000593280 NEK1Q96PY6 1258 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 ALDH8A1Q9H2A2 487 aaPredicted RBP14.23□□□□□ -0.13
NPC1-214ENST00000593280 PTMSP20962 102 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 PKP1Q13835 747 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 UBE4AQ14139 1066 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 CNBD1Q8NA66 436 aa14.23□□□□□ -0.13
NPC1-214ENST00000593280 LARP6Q9BRS8 491 aaKnown RBP14.23□□□□□ -0.13
NPC1-214ENST00000593280 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
NPC1-214ENST00000593280 MYH13Q9UKX3 1938 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 BCAMP50895 628 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 UBE3CQ15386 1083 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 CLEC17AQ6ZS10 378 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 CCDC24Q8N4L8 307 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 PUS7LQ9H0K6 701 aaKnown RBP14.22□□□□□ -0.13
NPC1-214ENST00000593280 CTNNA3Q9UI47 895 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 MINPP1Q9UNW1 487 aa14.22□□□□□ -0.13
NPC1-214ENST00000593280 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
NPC1-214ENST00000593280 GPAA1O43292 621 aa14.21□□□□□ -0.13
NPC1-214ENST00000593280 LARGE1O95461 756 aa14.21□□□□□ -0.13
NPC1-214ENST00000593280 HMGB1P09429 215 aaKnown RBP14.21□□□□□ -0.13
NPC1-214ENST00000593280 PDE6AP16499 860 aa14.21□□□□□ -0.13
NPC1-214ENST00000593280 DEKP35659 375 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms