RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 OCSTAMPQ9BR26 566 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 THSD7AQ9UPZ6 1657 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 CAMTA1Q9Y6Y1 1673 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 TONSLQ96HA7 1378 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 SPATA31A5Q5VU36 1347 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 SPATA31A7Q8IWB4 1347 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 RNF135Q8IUD6 432 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 STK32AQ8WU08 396 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 TMPRSS4Q9NRS4 437 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 MKRN1Q9UHC7 482 aaKnown RBP10.61□□□□□ -0.71
VMP1-213ENST00000591877 PCDHB9Q9Y5E1 797 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
VMP1-213ENST00000591877 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 MON2Q7Z3U7 1717 aa10.61□□□□□ -0.71
VMP1-213ENST00000591877 SLIT3O75094 1523 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 PTK7Q13308 1070 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 LARP1Q6PKG0 1096 aaKnown RBP10.6□□□□□ -0.71
VMP1-213ENST00000591877 BEND7Q8N7W2 519 aaPredicted RBP10.6□□□□□ -0.71
VMP1-213ENST00000591877 PLPP7Q8NBV4 271 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 NEDD1Q8NHV4 660 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 CCER1Q8TC90 406 aaPredicted RBP10.6□□□□□ -0.71
VMP1-213ENST00000591877 CARD11Q9BXL7 1154 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 CPDO75976 1380 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 COL18A1P39060 1754 aa10.6□□□□□ -0.71
VMP1-213ENST00000591877 CPSF1Q10570 1443 aaKnown RBP10.59□□□□□ -0.71
VMP1-213ENST00000591877 GPR25O00155 361 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 GCP02774 474 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 NCOA4Q13772 614 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 ZBTB33Q86T24 672 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 NLRP13Q86W25 1043 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
VMP1-213ENST00000591877 KRTAP4-8Q9BYQ9 185 aa10.59□□□□□ -0.71
VMP1-213ENST00000591877 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
VMP1-213ENST00000591877 SPATA31A1Q5TZJ5 1347 aa10.58□□□□□ -0.71
VMP1-213ENST00000591877 RGPD5Q99666 1765 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 CD163L1Q9NR16 1453 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
VMP1-213ENST00000591877 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 TRIM50Q86XT4 487 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 ADAM32Q8TC27 787 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
VMP1-213ENST00000591877 STRN4Q9NRL3 753 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 MBIPQ9NS73 344 aa10.58□□□□□ -0.72
VMP1-213ENST00000591877 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
VMP1-213ENST00000591877 RASA1P20936 1047 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 RAB15P59190 212 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 SWI5Q1ZZU3 235 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 EML3Q32P44 896 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 LYSMD3Q7Z3D4 306 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 DEPDC4Q8N2C3 294 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 TTC21BQ7Z4L5 1316 aa10.57□□□□□ -0.72
VMP1-213ENST00000591877 BCRP11274 1271 aa10.56□□□□□ -0.72
VMP1-213ENST00000591877 RHOQP17081 205 aa10.56□□□□□ -0.72
VMP1-213ENST00000591877 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
VMP1-213ENST00000591877 DEFB132Q7Z7B7 95 aa10.56□□□□□ -0.72
VMP1-213ENST00000591877 ZNF784Q8NCA9 323 aaPredicted RBP10.56□□□□□ -0.72
VMP1-213ENST00000591877 ZNF837Q96EG3 531 aaPredicted RBP10.56□□□□□ -0.72
VMP1-213ENST00000591877 USP54Q70EL1 1684 aa10.56□□□□□ -0.72
VMP1-213ENST00000591877 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
VMP1-213ENST00000591877 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
VMP1-213ENST00000591877 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
VMP1-213ENST00000591877 ADH1AP07327 375 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 SSFA2P28290 1259 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 ARID4AP29374 1257 aaPredicted RBP10.55□□□□□ -0.72
VMP1-213ENST00000591877 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
VMP1-213ENST00000591877 ATP1A2P50993 1020 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 ANKMY2Q8IV38 441 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 TESK2Q96S53 571 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
VMP1-213ENST00000591877 KTN1Q86UP2 1357 aaKnown RBP10.54□□□□□ -0.72
VMP1-213ENST00000591877 PTGIRP43119 386 aa10.54□□□□□ -0.72
VMP1-213ENST00000591877 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
VMP1-213ENST00000591877 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
VMP1-213ENST00000591877 SLC12A5Q9H2X9 1139 aa10.54□□□□□ -0.72
VMP1-213ENST00000591877 USP35Q9P2H5 1018 aa10.54□□□□□ -0.72
VMP1-213ENST00000591877 NOD1Q9Y239 953 aa10.54□□□□□ -0.72
VMP1-213ENST00000591877 TTC21AQ8NDW8 1320 aa10.54□□□□□ -0.72
VMP1-213ENST00000591877 NFAT5O94916 1531 aa10.53□□□□□ -0.72
VMP1-213ENST00000591877 AATKQ6ZMQ8 1374 aa10.53□□□□□ -0.72
VMP1-213ENST00000591877 PARP4Q9UKK3 1724 aaKnown RBP10.53□□□□□ -0.72
VMP1-213ENST00000591877 ST20-MTHFSA0A0A6YYL1 179 aa10.53□□□□□ -0.72
VMP1-213ENST00000591877 EVA1CP58658 441 aa10.53□□□□□ -0.72
VMP1-213ENST00000591877 ACDQ96AP0 544 aa10.53□□□□□ -0.72
VMP1-213ENST00000591877 WNK3Q9BYP7 1800 aa10.53□□□□□ -0.72
VMP1-213ENST00000591877 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 ARHGEF25Q86VW2 580 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
VMP1-213ENST00000591877 Q8N3U1 123 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 LARGE2Q8N3Y3 721 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 OGFOD1Q8N543 542 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 C1orf216Q8TAB5 229 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 PUS7Q96PZ0 661 aaKnown RBP10.52□□□□□ -0.73
VMP1-213ENST00000591877 LTN1O94822 1766 aa10.52□□□□□ -0.73
VMP1-213ENST00000591877 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms