RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF75DP51815 510 aa19.76■□□□□ 0.75
SMARCA4-215ENST00000590574 SLC52A2Q9HAB3 445 aa19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 KIF5CO60282 957 aa19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 RIOK3O14730 519 aaKnown RBP19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 LIG1P18858 919 aa19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 LLPHQ9BRT6 129 aaKnown RBP19.75■□□□□ 0.75
SMARCA4-215ENST00000590574 PLBD2Q8NHP8 589 aa19.74■□□□□ 0.75
SMARCA4-215ENST00000590574 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
SMARCA4-215ENST00000590574 IFNKQ9P0W0 207 aa19.74■□□□□ 0.75
SMARCA4-215ENST00000590574 EIF3JO75822 258 aaKnown RBP19.74■□□□□ 0.75
SMARCA4-215ENST00000590574 NOM1Q5C9Z4 860 aaKnown RBP19.74■□□□□ 0.75
SMARCA4-215ENST00000590574 UQCRFS1P1P0C7P4 283 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 ATL3Q6DD88 541 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 A0A1B0GUL7 405 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 RXRAP19793 462 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 CAVIN4Q5BKX8 364 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 IQCA1Q86XH1 822 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 PROSER3Q2NL68 480 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 KBTBD3Q8NAB2 608 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 CTCFLQ8NI51 663 aaPredicted RBP19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 DEF6Q9H4E7 631 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 DNAI1Q9UI46 699 aa19.73■□□□□ 0.75
SMARCA4-215ENST00000590574 KIF4BQ2VIQ3 1234 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 CEP89Q96ST8 783 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 BRAPQ7Z569 592 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 ZNF594Q96JF6 807 aaPredicted RBP19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 ATP5JP18859 108 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 EIF5P55010 431 aaKnown RBP19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 CATIPQ7Z7H3 387 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 GTF3C6Q969F1 213 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 POLR3GO15318 223 aaPredicted RBP19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 GNG11P61952 73 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 WTAPQ15007 396 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 SOGA3Q5TF21 947 aa19.72■□□□□ 0.75
SMARCA4-215ENST00000590574 EYA2O00167 538 aa19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 A2ML1A8K2U0 1454 aa19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 SETQ01105 290 aaPredicted RBP19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 OTUD7BQ6GQQ9 843 aa19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 KIAA1328Q86T90 577 aa19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
SMARCA4-215ENST00000590574 SLU7O95391 586 aaKnown RBP19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 CCDC102AQ96A19 550 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 TTC6Q86TZ1 520 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 TSC1Q92574 1164 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 NUP88Q99567 741 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 AXDND1Q5T1B0 1012 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 PI4K2BQ8TCG2 481 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 KRT23Q9C075 422 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 TLR7Q9NYK1 1049 aaKnown RBP19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 NLRP5P59047 1200 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 SKIDA1Q1XH10 827 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 KANK3Q6NY19 840 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 CADPS2Q86UW7 1296 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 TANGO6Q9C0B7 1094 aa19.7■□□□□ 0.74
SMARCA4-215ENST00000590574 KRT222Q8N1A0 295 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 SEC62Q99442 399 aaKnown RBP19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 PTPRMP28827 1452 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 GOLGA6L9A6NEM1 432 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 NR1I2O75469 434 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 BMS1Q14692 1282 aaKnown RBP19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 RTN1Q16799 776 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 MAP4K1Q92918 833 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 SLC4A4Q9Y6R1 1079 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 NLRP1Q9C000 1473 aa19.69■□□□□ 0.74
SMARCA4-215ENST00000590574 POLA2Q14181 598 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 LARGE1O95461 756 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 CLEC17AQ6ZS10 378 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 CCDC148Q8NFR7 591 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 AFMP43652 599 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 NAA16Q6N069 864 aaPredicted RBP19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 CNNM2Q9H8M5 875 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 ZDHHC9Q9Y397 364 aa19.68■□□□□ 0.74
SMARCA4-215ENST00000590574 CCDC181Q5TID7 509 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 SYT10Q6XYQ8 523 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 NEXMIFQ5QGS0 1516 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 CCDC12Q8WUD4 166 aaPredicted RBP19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 C19orf44Q9H6X5 657 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 ZNF652Q9Y2D9 606 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 KRT18P05783 430 aaKnown RBP19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 ARHGEF40Q8TER5 1519 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 PRAMEF22A3QJZ6 481 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 FAM193AP78312 1265 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 ZSWIM4Q9H7M6 989 aa19.67■□□□□ 0.74
SMARCA4-215ENST00000590574 ZC3H13Q5T200 1668 aaKnown RBP19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 TAF3Q5VWG9 929 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 XAGE2Q96GT9 111 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 E7EWF7 191 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 ATP2B2Q01814 1243 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 USP5P45974 858 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 JAKMIP3Q5VZ66 844 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
SMARCA4-215ENST00000590574 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
SMARCA4-215ENST00000590574 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
SMARCA4-215ENST00000590574 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms