RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 STK32BQ9NY57 414 aa18.2■□□□□ 0.5
PTPRS-205ENST00000588012 PHACTR2O75167 634 aa18.2■□□□□ 0.5
PTPRS-205ENST00000588012 CAVIN2O95810 425 aa18.2■□□□□ 0.5
PTPRS-205ENST00000588012 IFI16Q16666 785 aaKnown RBP18.2■□□□□ 0.5
PTPRS-205ENST00000588012 TBC1D32Q96NH3 1257 aa18.2■□□□□ 0.5
PTPRS-205ENST00000588012 SYNCQ9H7C4 482 aa18.2■□□□□ 0.5
PTPRS-205ENST00000588012 N4BP3O15049 544 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
PTPRS-205ENST00000588012 GOLGA6L9A6NEM1 432 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 CNBD1Q8NA66 436 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 UHRF1BP1Q6BDS2 1440 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 CALML3P27482 149 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 ZNF165P49910 485 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 TRMT1Q9NXH9 659 aaKnown RBP18.19■□□□□ 0.5
PTPRS-205ENST00000588012 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
PTPRS-205ENST00000588012 TBX22Q9Y458 520 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 A0A1W2PP64 1363 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 COMMD10Q9Y6G5 202 aa18.19■□□□□ 0.5
PTPRS-205ENST00000588012 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
PTPRS-205ENST00000588012 CTAGE1Q96RT6 745 aa18.18■□□□□ 0.5
PTPRS-205ENST00000588012 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
PTPRS-205ENST00000588012 PDCL2Q8N4E4 241 aa18.18■□□□□ 0.5
PTPRS-205ENST00000588012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.18■□□□□ 0.59e-7■□□□□ 10.1
PTPRS-205ENST00000588012 KRT2P35908 639 aa18.18■□□□□ 0.5
PTPRS-205ENST00000588012 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
PTPRS-205ENST00000588012 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
PTPRS-205ENST00000588012 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
PTPRS-205ENST00000588012 POTEB2H3BUK9 544 aa18.17■□□□□ 0.5
PTPRS-205ENST00000588012 ASIC1P78348 528 aa18.17■□□□□ 0.5
PTPRS-205ENST00000588012 SHTN1A0MZ66 631 aa18.17■□□□□ 0.5
PTPRS-205ENST00000588012 PARP10Q53GL7 1025 aa18.17■□□□□ 0.5
PTPRS-205ENST00000588012 PTPRKQ15262 1439 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 EHBP1Q8NDI1 1231 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 CALRP27797 417 aaKnown RBP18.16■□□□□ 0.5
PTPRS-205ENST00000588012 MRPS27Q92552 414 aaKnown RBP18.16■□□□□ 0.5
PTPRS-205ENST00000588012 BCCIPQ9P287 314 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTPRS-205ENST00000588012 ADCY5O95622 1261 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 ACTN2P35609 894 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 HLTFQ14527 1009 aaKnown RBP eCLIP18.16■□□□□ 0.59e-7■□□□□ 8.6
PTPRS-205ENST00000588012 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 SPAG5Q96R06 1193 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
PTPRS-205ENST00000588012 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 SH2D4AQ9H788 454 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 TRIM75PA6NK02 468 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 STAMBPO95630 424 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 LMAN1P49257 510 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 KRT79Q5XKE5 535 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 PABPN1LA6NDY0 278 aaKnown RBP18.15■□□□□ 0.5
PTPRS-205ENST00000588012 VAMP4O75379 141 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 PCDHB15Q9Y5E8 787 aa18.15■□□□□ 0.5
PTPRS-205ENST00000588012 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.5
PTPRS-205ENST00000588012 IMPG2Q9BZV3 1241 aa18.14■□□□□ 0.5
PTPRS-205ENST00000588012 RBM28Q9NW13 759 aaKnown RBP18.14■□□□□ 0.5
PTPRS-205ENST00000588012 JAG2Q9Y219 1238 aa18.14■□□□□ 0.5
PTPRS-205ENST00000588012 PSMA7O14818 248 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 AKR1B10O60218 316 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 UFL1O94874 794 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 FAM13AO94988 1023 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 GNA11P29992 359 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 PLBD2Q8NHP8 589 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTPRS-205ENST00000588012 GJA3Q9Y6H8 435 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 SPAG1Q07617 926 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 TSPYL6Q8N831 410 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 TCHPQ9BT92 498 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 JADE2Q9NQC1 790 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
PTPRS-205ENST00000588012 GOLGA6L10A0A0M3HER8 536 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 MARCKSP29966 332 aaPredicted RBP18.13■□□□□ 0.49
PTPRS-205ENST00000588012 MAP3K9P80192 1104 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 LRRC45Q96CN5 670 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 CNPY2Q9Y2B0 182 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 TTC12Q9H892 705 aaPredicted RBP18.13■□□□□ 0.49
PTPRS-205ENST00000588012 WDR62O43379 1518 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 PLVAPQ9BX97 442 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
PTPRS-205ENST00000588012 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
PTPRS-205ENST00000588012 UBASH3AP57075 661 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 RAD50Q92878 1312 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 SNW1Q13573 536 aaKnown RBP18.13■□□□□ 0.49
PTPRS-205ENST00000588012 SPECC1Q5M775 1068 aa18.13■□□□□ 0.49
PTPRS-205ENST00000588012 ABCC2Q92887 1545 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 TSNARE1Q96NA8 513 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 MRVI1Q9Y6F6 885 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 DHX58Q96C10 678 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 C16orf45Q96MC5 204 aaPredicted RBP18.12■□□□□ 0.49
PTPRS-205ENST00000588012 NAP1L4Q99733 375 aaKnown RBP18.12■□□□□ 0.49
PTPRS-205ENST00000588012 SBNO1A3KN83 1393 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 CREB3L3Q68CJ9 461 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 HELLSQ9NRZ9 838 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 KRT24Q2M2I5 525 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
PTPRS-205ENST00000588012 GIGYF2Q6Y7W6 1299 aaKnown RBP18.12■□□□□ 0.49
PTPRS-205ENST00000588012 DHX37Q8IY37 1157 aaKnown RBP18.12■□□□□ 0.49
PTPRS-205ENST00000588012 TEX11Q8IYF3 940 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms