RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 EIF4A1P60842 406 aaKnown RBP7.1□□□□□ -1.27
SDF2-206ENST00000587788 SLC39A6Q13433 755 aa7.1□□□□□ -1.27
SDF2-206ENST00000587788 ANKRD45Q5TZF3 282 aa7.1□□□□□ -1.27
SDF2-206ENST00000587788 C22orf23Q9BZE7 217 aa7.1□□□□□ -1.27
SDF2-206ENST00000587788 DCTPP1Q9H773 170 aa7.1□□□□□ -1.27
SDF2-206ENST00000587788 KIF13BQ9NQT8 1826 aa7.1□□□□□ -1.27
SDF2-206ENST00000587788 SCN7AQ01118 1682 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 CFAP99D6REC4 459 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 SNRPA1P09661 255 aaKnown RBP7.09□□□□□ -1.27
SDF2-206ENST00000587788 ZNF790Q6PG37 636 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 COL23A1Q86Y22 540 aaPredicted RBP7.09□□□□□ -1.27
SDF2-206ENST00000587788 TTC5Q8N0Z6 440 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 ANKRD44Q8N8A2 993 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 PRR14Q9BWN1 585 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 TFCP2L1Q9NZI6 479 aa7.09□□□□□ -1.27
SDF2-206ENST00000587788 N4BP2Q86UW6 1770 aaPredicted RBP7.08□□□□□ -1.28
SDF2-206ENST00000587788 APBB1O00213 710 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 KCNQ3O43525 872 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 GPR37L1O60883 481 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 GIGYF1O75420 1035 aaPredicted RBP7.08□□□□□ -1.28
SDF2-206ENST00000587788 RBM25P49756 843 aaKnown RBP7.08□□□□□ -1.28
SDF2-206ENST00000587788 ANKRD13DQ6ZTN6 518 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 FMNL2Q96PY5 1086 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
SDF2-206ENST00000587788 DBF4Q9UBU7 674 aaPredicted RBP7.08□□□□□ -1.28
SDF2-206ENST00000587788 BRCA1P38398 1863 aaKnown RBP7.08□□□□□ -1.28
SDF2-206ENST00000587788 RAD21O60216 631 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 GNAI3P08754 354 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 BCAMP50895 628 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 APLP1P51693 650 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 NFKBIBQ15653 356 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 MSL1Q68DK7 614 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 CASC1Q6TDU7 716 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 RETREG3Q86VR2 466 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 DNAJC10Q8IXB1 793 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 SIRT2Q8IXJ6 389 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 SNX21Q969T3 373 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 TRIM34Q9BYJ4 488 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 SPON1Q9HCB6 807 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 HMX1Q9NP08 348 aaPredicted RBP7.07□□□□□ -1.28
SDF2-206ENST00000587788 HYPKQ9NX55 129 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 TSR3Q9UJK0 312 aaKnown RBP7.07□□□□□ -1.28
SDF2-206ENST00000587788 HPS5Q9UPZ3 1129 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 HDAC5Q9UQL6 1122 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 CACNA1SQ13698 1873 aa7.07□□□□□ -1.28
SDF2-206ENST00000587788 NUP98P52948 1817 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 CNTNAP4Q9C0A0 1308 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 C6orf229H3BNL8 230 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 CDC45O75419 566 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 CRKLP46109 303 aaKnown RBP7.06□□□□□ -1.28
SDF2-206ENST00000587788 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
SDF2-206ENST00000587788 HDGFL1Q5TGJ6 251 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 INTS5Q6P9B9 1019 aaKnown RBP7.06□□□□□ -1.28
SDF2-206ENST00000587788 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
SDF2-206ENST00000587788 ZNF496Q96IT1 587 aaPredicted RBP7.06□□□□□ -1.28
SDF2-206ENST00000587788 NRXN2Q9P2S2 1712 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 ANKRD31Q8N7Z5 1873 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 HEG1Q9ULI3 1381 aa7.06□□□□□ -1.28
SDF2-206ENST00000587788 PXDNLA1KZ92 1463 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 PRAMEF22A3QJZ6 481 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 STARD3NLO95772 234 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 DDX58O95786 925 aaKnown RBP7.05□□□□□ -1.28
SDF2-206ENST00000587788 GNAI2P04899 355 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 CYP19A1P11511 503 aaPredicted RBP7.05□□□□□ -1.28
SDF2-206ENST00000587788 EIF2S2P20042 333 aaKnown RBP7.05□□□□□ -1.28
SDF2-206ENST00000587788 SSFA2P28290 1259 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 CTDSPL2Q05D32 466 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 Q3C1V9 767 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 PUS10Q3MIT2 529 aaKnown RBP7.05□□□□□ -1.28
SDF2-206ENST00000587788 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 CEP85Q6P2H3 762 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 HSCBQ8IWL3 235 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 SYMPKQ92797 1274 aaKnown RBP7.05□□□□□ -1.28
SDF2-206ENST00000587788 WNT2BQ93097 391 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 GDPD2Q9HCC8 539 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 DDX21Q9NR30 783 aaKnown RBP eCLIP7.05□□□□□ -1.28
SDF2-206ENST00000587788 TBC1D2BQ9UPU7 963 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 CHD4Q14839 1912 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 ANKRD36CQ5JPF3 1778 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 DLEC1Q9Y238 1755 aa7.05□□□□□ -1.28
SDF2-206ENST00000587788 ERBB4Q15303 1308 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 ATP10DQ9P241 1426 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 GOLGA8CPA6NN73 597 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 PPP4CP60510 307 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 KRT24Q2M2I5 525 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 RC3H1Q5TC82 1133 aaKnown RBP7.04□□□□□ -1.28
SDF2-206ENST00000587788 PLEKHM2Q8IWE5 1019 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 PRR7Q8TB68 274 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 THAP11Q96EK4 314 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 OSBPL3Q9H4L5 887 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 CHMP5Q9NZZ3 219 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 SRP68Q9UHB9 627 aaKnown RBP7.04□□□□□ -1.28
SDF2-206ENST00000587788 ZBTB1Q9Y2K1 713 aa7.04□□□□□ -1.28
SDF2-206ENST00000587788 COL11A2P13942 1736 aaPredicted RBP7.04□□□□□ -1.28
SDF2-206ENST00000587788 RPS6KA4O75676 772 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 PTMSP20962 102 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 PIP4K2AP48426 406 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms