RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PPP1R12CQ9BZL4 782 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 RAPGEF2Q9Y4G8 1499 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 MICAL2O94851 1124 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 SOX18P35713 384 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 LRP8Q14114 963 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 FAM35AQ86V20 835 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 CMTR1Q8N1G2 835 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 TLR7Q9NYK1 1049 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 SUPT6HQ7KZ85 1726 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 AKNAQ7Z591 1439 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 MYO3AQ8NEV4 1616 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L15C9J2P7 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L10C9JJH3 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L13C9JLJ4 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L12C9JPN9 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L11C9JVI0 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L21D6R901 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L18D6R9N7 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L22D6RA61 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L17D6RBQ6 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L19D6RCP7 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L20D6RJB6 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 EIF2AK2P19525 551 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 CYP27A1Q02318 531 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 USP17L24Q0WX57 530 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 PSAPL1Q6NUJ1 521 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 GLMNQ92990 594 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 CDK13Q14004 1512 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 LOC102724428A0A0B4J2F2 783 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 DGKGP49619 791 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 IRAK1P51617 712 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 SIK1P57059 783 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 ZNF594Q96JF6 807 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 TFIP11Q9UBB9 837 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 SAMM50Q9Y512 469 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 PTPRGP23470 1445 aa2.95□□□□□ -1.94
SMCHD1-211ENST00000584897 COBLO75128 1261 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 ATP4AP20648 1035 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 DPYDQ12882 1025 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 C16orf46Q6P387 395 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 LINC00114Q6XXX2 140 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 TP53INP1Q96A56 240 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 CCDC120Q96HB5 630 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 AKTIPQ9H8T0 292 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 CAMSAP1Q5T5Y3 1602 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 BIN1O00499 593 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 NFKB1P19838 968 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 RBM25P49756 843 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 MSL1Q68DK7 614 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 GZF1Q9H116 711 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 PCMTD2Q9NV79 361 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 DISP1Q96F81 1524 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 LRRC7Q96NW7 1537 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 FAM13AO94988 1023 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 EGFRP00533 1210 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 EDN3P14138 238 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 TYRO3Q06418 890 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 ANKRD34AQ69YU3 496 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 PAOXQ6QHF9 649 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 IQSEC3Q9UPP2 1182 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 PPME1Q9Y570 386 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 MAFBQ9Y5Q3 323 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 SHPRHQ149N8 1683 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 IQGAP2Q13576 1575 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 NEURL4Q96JN8 1562 aa2.94□□□□□ -1.94
SMCHD1-211ENST00000584897 CARMIL2Q6F5E8 1435 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 LORP23490 312 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 SFSWAPQ12872 951 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 SF3B2Q13435 895 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 KANK4Q5T7N3 995 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 DNAJC14Q6Y2X3 702 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 TXNDC2Q86VQ3 553 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 METTL22Q9BUU2 404 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 C2orf49Q9BVC5 232 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 SHISA8B8ZZ34 492 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 UBAP1LF5GYI3 381 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 PDE3BQ13370 1112 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 RETREG2Q8NC44 543 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 RAXQ9Y2V3 346 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 XIRP1Q702N8 1843 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 DOC2BQ14184 412 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 ARHGAP27Q6ZUM4 889 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 DHX32Q7L7V1 743 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 DEPDC4Q8N2C3 294 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 CYP4F12Q9HCS2 524 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 KIF27Q86VH2 1401 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 GOLGA3Q08378 1498 aa2.93□□□□□ -1.94
SMCHD1-211ENST00000584897 A0A0A0MRY4 1105 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 XYLBO75191 536 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 TXLNAP40222 546 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 USP11P51784 963 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 DGKZQ13574 1117 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 LDLRAD1Q5T700 205 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 PDE12Q6L8Q7 609 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 FDX2Q6P4F2 183 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 FCHSD1Q86WN1 690 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 NCAPG2Q86XI2 1143 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 TSPAN10Q9H1Z9 355 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 ZMIZ1Q9ULJ6 1067 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 NOVA2Q9UNW9 492 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms