RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
GGA3-212ENST00000582376 SH3TC2Q8TF17 1288 aa12.18□□□□□ -0.46
GGA3-212ENST00000582376 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
GGA3-212ENST00000582376 CLMNQ96JQ2 1002 aa12.18□□□□□ -0.46
GGA3-212ENST00000582376 COL4A1P02462 1669 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
GGA3-212ENST00000582376 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
GGA3-212ENST00000582376 PPP1R12BO60237 982 aaPredicted RBP12.17□□□□□ -0.46
GGA3-212ENST00000582376 SASH1O94885 1247 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 ANXA1P04083 346 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
GGA3-212ENST00000582376 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
GGA3-212ENST00000582376 PROSER3Q2NL68 480 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 COPS6Q7L5N1 327 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 PTPN18Q99952 460 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 TIMELESSQ9UNS1 1208 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 STXBP5LQ9Y2K9 1186 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 LAMB1P07942 1786 aa12.17□□□□□ -0.46
GGA3-212ENST00000582376 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
GGA3-212ENST00000582376 UNCXA6NJT0 531 aa12.16□□□□□ -0.46
GGA3-212ENST00000582376 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
GGA3-212ENST00000582376 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
GGA3-212ENST00000582376 FAM89AQ96GI7 184 aa12.16□□□□□ -0.46
GGA3-212ENST00000582376 BRCA2P51587 3418 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
GGA3-212ENST00000582376 MYO3BQ8WXR4 1341 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 GJA5P36382 358 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 MMP14P50281 582 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 MXD3Q9BW11 206 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 ZFYVE28Q9HCC9 887 aa12.15□□□□□ -0.46
GGA3-212ENST00000582376 KIF22Q14807 665 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 MTFR1Q15390 333 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 TAF1CQ15572 869 aaPredicted RBP12.14□□□□□ -0.47
GGA3-212ENST00000582376 DACT2Q5SW24 774 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 UBE2Q1Q7Z7E8 422 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 FBXW7Q969H0 707 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 DEFB129Q9H1M3 183 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 CENPFP49454 3210 aa12.14□□□□□ -0.47
GGA3-212ENST00000582376 XDHP47989 1333 aa12.13□□□□□ -0.47
GGA3-212ENST00000582376 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
GGA3-212ENST00000582376 IREB2P48200 963 aaKnown RBP12.13□□□□□ -0.47
GGA3-212ENST00000582376 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
GGA3-212ENST00000582376 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
GGA3-212ENST00000582376 IRS4O14654 1257 aaPredicted RBP12.12□□□□□ -0.47
GGA3-212ENST00000582376 GJA8P48165 433 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 PRMT2P55345 433 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
GGA3-212ENST00000582376 STRIP1Q5VSL9 837 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 Q7L0L9 218 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
GGA3-212ENST00000582376 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 SSC5DA1L4H1 1573 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 COL6A3P12111 3177 aa12.12□□□□□ -0.47
GGA3-212ENST00000582376 EVI5O60447 810 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 GNRH1P01148 92 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 NEFMP07197 916 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 GJB1P08034 283 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 ZBED3Q96IU2 234 aaPredicted RBP12.11□□□□□ -0.47
GGA3-212ENST00000582376 ISCA1Q9BUE6 129 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
GGA3-212ENST00000582376 RANBP2P49792 3224 aaKnown RBP12.1□□□□□ -0.47
GGA3-212ENST00000582376 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
GGA3-212ENST00000582376 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
GGA3-212ENST00000582376 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
GGA3-212ENST00000582376 LACTBP83111 547 aaPredicted RBP12.1□□□□□ -0.47
GGA3-212ENST00000582376 KIAA0825Q8IV33 1275 aa12.1□□□□□ -0.47
GGA3-212ENST00000582376 OPTNQ96CV9 577 aa12.1□□□□□ -0.47
GGA3-212ENST00000582376 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
GGA3-212ENST00000582376 PRDM6Q9NQX0 595 aa12.1□□□□□ -0.47
GGA3-212ENST00000582376 MTMR10Q9NXD2 777 aa12.1□□□□□ -0.47
GGA3-212ENST00000582376 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 CCL15-CCL14A0A0B4J2E2 113 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 USP2O75604 605 aaPredicted RBP12.09□□□□□ -0.47
GGA3-212ENST00000582376 CCL5P13501 91 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 CCL15Q16663 113 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 PLBD2Q8NHP8 589 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 BRI3BPQ8WY22 251 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 ELP3Q9H9T3 547 aa12.09□□□□□ -0.47
GGA3-212ENST00000582376 TLR2O60603 784 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 HSP90B1P14625 803 aaKnown RBP12.08□□□□□ -0.48
GGA3-212ENST00000582376 GRK4P32298 578 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 BMP8BP34820 402 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 GTF2A2P52657 109 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 CCDC152Q4G0S7 254 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
GGA3-212ENST00000582376 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 COA1Q9GZY4 146 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 RNF208Q9H0X6 261 aa12.08□□□□□ -0.48
GGA3-212ENST00000582376 ZNF804BA4D1E1 1349 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms