RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-213ENST00000580446 PDIA6Q15084 440 aa18.69■□□□□ 0.58
CSNK1D-213ENST00000580446 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
CSNK1D-213ENST00000580446 ANKIB1Q9P2G1 1089 aa18.69■□□□□ 0.58
CSNK1D-213ENST00000580446 USP17L3A6NCW0 530 aa18.68■□□□□ 0.58
CSNK1D-213ENST00000580446 USP17L4A6NCW7 530 aa18.68■□□□□ 0.58
CSNK1D-213ENST00000580446 ZBTB48P10074 688 aaPredicted RBP18.68■□□□□ 0.58
CSNK1D-213ENST00000580446 USP17L1Q7RTZ2 530 aa18.68■□□□□ 0.58
CSNK1D-213ENST00000580446 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.68■□□□□ 0.584e-6■■■□□ 14.8
CSNK1D-213ENST00000580446 FAM89AQ96GI7 184 aa18.68■□□□□ 0.58
CSNK1D-213ENST00000580446 RAPGEFL1Q9UHV5 662 aa18.68■□□□□ 0.58
CSNK1D-213ENST00000580446 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
CSNK1D-213ENST00000580446 GGA1Q9UJY5 639 aa18.67■□□□□ 0.58
CSNK1D-213ENST00000580446 STXBP5LQ9Y2K9 1186 aa18.67■□□□□ 0.58
CSNK1D-213ENST00000580446 ZSWIM8A7E2V4 1837 aa18.67■□□□□ 0.58
CSNK1D-213ENST00000580446 XAGE3Q8WTP9 111 aa18.66■□□□□ 0.58
CSNK1D-213ENST00000580446 NR2E3Q9Y5X4 410 aa18.66■□□□□ 0.58
CSNK1D-213ENST00000580446 RPS8P62241 208 aaKnown RBP18.65■□□□□ 0.58
CSNK1D-213ENST00000580446 OTUD7BQ6GQQ9 843 aa18.65■□□□□ 0.58
CSNK1D-213ENST00000580446 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
CSNK1D-213ENST00000580446 UBE2Q1Q7Z7E8 422 aa18.65■□□□□ 0.58
CSNK1D-213ENST00000580446 HTATIP2Q9BUP3 242 aa18.65■□□□□ 0.58
CSNK1D-213ENST00000580446 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-213ENST00000580446 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
CSNK1D-213ENST00000580446 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
CSNK1D-213ENST00000580446 PRDM6Q9NQX0 595 aa18.64■□□□□ 0.57
CSNK1D-213ENST00000580446 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-213ENST00000580446 TAF1CQ15572 869 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-213ENST00000580446 DACT2Q5SW24 774 aa18.63■□□□□ 0.57
CSNK1D-213ENST00000580446 CCDC85AQ96PX6 553 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-213ENST00000580446 ELP3Q9H9T3 547 aa18.63■□□□□ 0.57
CSNK1D-213ENST00000580446 MTMR10Q9NXD2 777 aa18.63■□□□□ 0.57
CSNK1D-213ENST00000580446 A0A1W2PPC1 479 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 ATP5J2-PTCD1G3V325 749 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 OGFOD1Q8N543 542 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 DEFB129Q9H1M3 183 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 PODXL2Q9NZ53 605 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 PCDHAC2Q9Y5I4 1007 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 VCANP13611 3396 aa18.62■□□□□ 0.57
CSNK1D-213ENST00000580446 HSP90AB3PQ58FF7 597 aa18.61■□□□□ 0.57
CSNK1D-213ENST00000580446 BRI3BPQ8WY22 251 aa18.61■□□□□ 0.57
CSNK1D-213ENST00000580446 SPTBN5Q9NRC6 3674 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-213ENST00000580446 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
CSNK1D-213ENST00000580446 EVI5O60447 810 aa18.6■□□□□ 0.57
CSNK1D-213ENST00000580446 FARP2O94887 1054 aaPredicted RBP18.6■□□□□ 0.57
CSNK1D-213ENST00000580446 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
CSNK1D-213ENST00000580446 KIAA0825Q8IV33 1275 aa18.6■□□□□ 0.57
CSNK1D-213ENST00000580446 FAM43AQ8N2R8 423 aa18.6■□□□□ 0.57
CSNK1D-213ENST00000580446 CCL5P13501 91 aa18.59■□□□□ 0.57
CSNK1D-213ENST00000580446 MAP3K11Q16584 847 aa18.59■□□□□ 0.57
CSNK1D-213ENST00000580446 OPTNQ96CV9 577 aa18.59■□□□□ 0.57
CSNK1D-213ENST00000580446 ZFYVE28Q9HCC9 887 aa18.59■□□□□ 0.57
CSNK1D-213ENST00000580446 AOX1Q06278 1338 aa18.58■□□□□ 0.57
CSNK1D-213ENST00000580446 TESPA1A2RU30 521 aaPredicted RBP18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 COL9A1P20849 921 aa18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 CTGFP29279 349 aa18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 ARHGEF6Q15052 776 aa18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
CSNK1D-213ENST00000580446 CCL15-CCL14A0A0B4J2E2 113 aa18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 CLRN2A0PK11 232 aa18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 PPP1R12BO60237 982 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 GJA8P48165 433 aa18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 CCL15Q16663 113 aa18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 PODNQ7Z5L7 613 aa18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 RNF208Q9H0X6 261 aa18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 ZMYND8Q9ULU4 1186 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-213ENST00000580446 PER1O15534 1290 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-213ENST00000580446 USP2O75604 605 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-213ENST00000580446 BCAMP50895 628 aa18.56■□□□□ 0.56
CSNK1D-213ENST00000580446 LACTBP83111 547 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-213ENST00000580446 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
CSNK1D-213ENST00000580446 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
CSNK1D-213ENST00000580446 ZBED3Q96IU2 234 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-213ENST00000580446 BIN2Q9UBW5 565 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-213ENST00000580446 PSME4Q14997 1843 aa18.55■□□□□ 0.56
CSNK1D-213ENST00000580446 XDHP47989 1333 aa18.54■□□□□ 0.56
CSNK1D-213ENST00000580446 GJB1P08034 283 aa18.54■□□□□ 0.56
CSNK1D-213ENST00000580446 U2AF1L4Q8WU68 220 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-213ENST00000580446 FAM161BQ96MY7 647 aa18.54■□□□□ 0.56
CSNK1D-213ENST00000580446 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
CSNK1D-213ENST00000580446 IREB2P48200 963 aaKnown RBP18.53■□□□□ 0.56
CSNK1D-213ENST00000580446 KIF22Q14807 665 aa18.53■□□□□ 0.56
CSNK1D-213ENST00000580446 NKX2-3Q8TAU0 364 aa18.53■□□□□ 0.56
CSNK1D-213ENST00000580446 UNC93B1Q9H1C4 597 aa18.53■□□□□ 0.56
CSNK1D-213ENST00000580446 SYN1P17600 705 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 KLRK1P26718 216 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 GRK4P32298 578 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 TXNRD3Q86VQ6 643 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 ANKRD13AQ8IZ07 590 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 C7orf61Q8IZ16 206 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 TRIM47Q96LD4 638 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 GDF15Q99988 308 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
CSNK1D-213ENST00000580446 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms