RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 PHAXQ9H814 394 aaKnown RBP9.1□□□□□ -0.95
RNF43-204ENST00000580014 A0A087WZG4 1122 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 ERVV-1B6SEH8 477 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 ANXA1P04083 346 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 SSFA2P28290 1259 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 KSR2Q6VAB6 950 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 ATF7IPQ6VMQ6 1270 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 COPS6Q7L5N1 327 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 SCUBE3Q8IX30 993 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 BCL2L13Q9BXK5 485 aa9.09□□□□□ -0.95
RNF43-204ENST00000580014 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.95
RNF43-204ENST00000580014 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 TRIM27P14373 513 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 MYL6BP14649 208 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
RNF43-204ENST00000580014 RRP1P56182 461 aaKnown RBP9.08□□□□□ -0.96
RNF43-204ENST00000580014 PDE3AQ14432 1141 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 ZNF827Q17R98 1081 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 ZKSCAN2Q63HK3 967 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 AMIGO3Q86WK7 504 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 PNMA1Q8ND90 353 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 PLBD2Q8NHP8 589 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
RNF43-204ENST00000580014 ADCY9O60503 1353 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 C4BP0C0L5 1744 aa9.08□□□□□ -0.96
RNF43-204ENST00000580014 ABCC4O15439 1325 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 MYH14Q7Z406 1995 aaKnown RBP9.07□□□□□ -0.96
RNF43-204ENST00000580014 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 PIP4K2AP48426 406 aaPredicted RBP9.07□□□□□ -0.96
RNF43-204ENST00000580014 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 TRIM28Q13263 835 aaKnown RBP9.07□□□□□ -0.96
RNF43-204ENST00000580014 SLC15A2Q16348 729 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.07□□□□□ -0.96
RNF43-204ENST00000580014 FLAD1Q8NFF5 587 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 RTCBQ9Y3I0 505 aaKnown RBP9.07□□□□□ -0.96
RNF43-204ENST00000580014 SUPT16HQ9Y5B9 1047 aaKnown RBP9.07□□□□□ -0.96
RNF43-204ENST00000580014 COL15A1P39059 1388 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 TAF1LQ8IZX4 1826 aa9.07□□□□□ -0.96
RNF43-204ENST00000580014 MAP3K15Q6ZN16 1313 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 PI4KAP2A4QPH2 592 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 DDX58O95786 925 aaKnown RBP9.06□□□□□ -0.96
RNF43-204ENST00000580014 JUNDP17535 347 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 INTS3Q68E01 1043 aaKnown RBP9.06□□□□□ -0.96
RNF43-204ENST00000580014 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 PI4KAP1Q8N8J0 262 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 ADAMTS19Q8TE59 1207 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 METTL22Q9BUU2 404 aaPredicted RBP9.06□□□□□ -0.96
RNF43-204ENST00000580014 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 NARFQ9UHQ1 456 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 CACNA1FO60840 1977 aa9.06□□□□□ -0.96
RNF43-204ENST00000580014 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
RNF43-204ENST00000580014 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 RLBP1P12271 317 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
RNF43-204ENST00000580014 TRAPPC3LQ5T215 181 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 DZIP3Q86Y13 1208 aaKnown RBP9.05□□□□□ -0.96
RNF43-204ENST00000580014 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
RNF43-204ENST00000580014 DNAAF4Q8WXU2 420 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 FRAT1Q92837 279 aaPredicted RBP9.05□□□□□ -0.96
RNF43-204ENST00000580014 ISCA1Q9BUE6 129 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 STK32BQ9NY57 414 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 TNNQ9UQP3 1299 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 MAP3K2Q9Y2U5 619 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
RNF43-204ENST00000580014 EP400Q96L91 3159 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 PLIN1O60240 522 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 ALDH1L1O75891 902 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 IGKV5-2P06315 115 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 SOX11P35716 441 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 CCT4P50991 539 aaKnown RBP9.04□□□□□ -0.96
RNF43-204ENST00000580014 AIMP1Q12904 312 aaKnown RBP9.04□□□□□ -0.96
RNF43-204ENST00000580014 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 HLFQ16534 295 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 PTPRNQ16849 979 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 C20orf194Q5TEA3 1177 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 COL23A1Q86Y22 540 aaPredicted RBP9.04□□□□□ -0.96
RNF43-204ENST00000580014 ZNF34Q8IZ26 560 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 ALG2Q9H553 416 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 NUP188Q5SRE5 1749 aa9.04□□□□□ -0.96
RNF43-204ENST00000580014 UBR3Q6ZT12 1888 aa9.03□□□□□ -0.96
RNF43-204ENST00000580014 F6X3S4 739 aa9.03□□□□□ -0.96
RNF43-204ENST00000580014 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
RNF43-204ENST00000580014 HSP90AB3PQ58FF7 597 aa9.03□□□□□ -0.96
RNF43-204ENST00000580014 SMIM5Q71RC9 77 aa9.03□□□□□ -0.96
RNF43-204ENST00000580014 TFCP2L1Q9NZI6 479 aa9.03□□□□□ -0.96
RNF43-204ENST00000580014 UTYO14607 1347 aa9.03□□□□□ -0.96
RNF43-204ENST00000580014 PDIA4P13667 645 aaKnown RBP9.02□□□□□ -0.97
RNF43-204ENST00000580014 GYS1P13807 737 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 TM4SF1P30408 202 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 RFC4P35249 363 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms