RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 USP46P62068 366 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
TRIM25-208ENST00000574234 RGMBQ6NW40 437 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 FBXO46Q6PJ61 603 aaPredicted RBP7.12□□□□□ -1.27
TRIM25-208ENST00000574234 NUDT18Q6ZVK8 323 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 PSMD1Q99460 953 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 ADARB2Q9NS39 739 aaKnown RBP7.12□□□□□ -1.27
TRIM25-208ENST00000574234 CEP290O15078 2479 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 LAMB4A4D0S4 1761 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 KDM3BQ7LBC6 1761 aa7.12□□□□□ -1.27
TRIM25-208ENST00000574234 WASHC2AQ641Q2 1341 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 CDHR2Q9BYE9 1310 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 HOXA2O43364 376 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 FDX1P10109 184 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 HUNKP57058 714 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 ST5P78524 1137 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 KIF23Q02241 960 aaPredicted RBP7.11□□□□□ -1.27
TRIM25-208ENST00000574234 TBC1D9BQ66K14 1250 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 INTS3Q68E01 1043 aaKnown RBP7.11□□□□□ -1.27
TRIM25-208ENST00000574234 DNAJC10Q8IXB1 793 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 CNBD1Q8NA66 436 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 SLC39A7Q92504 469 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 GPRC5DQ9NZD1 345 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 HDAC9Q9UKV0 1011 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 PCDHGC3Q9UN70 934 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 ZBTB1Q9Y2K1 713 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 GJA3Q9Y6H8 435 aa7.11□□□□□ -1.27
TRIM25-208ENST00000574234 KIAA0100Q14667 2235 aaKnown RBP7.11□□□□□ -1.27
TRIM25-208ENST00000574234 SIPA1L3O60292 1781 aaPredicted RBP7.1□□□□□ -1.27
TRIM25-208ENST00000574234 A0A087WZG4 1122 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 KLRG2A4D1S0 409 aaPredicted RBP7.1□□□□□ -1.27
TRIM25-208ENST00000574234 HAX1O00165 279 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 NPR1P16066 1061 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 SOX11P35716 441 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 CDCA8Q53HL2 280 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 SYNE4Q8N205 404 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 PRR7Q8TB68 274 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 TATDN2Q93075 761 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 OTUD5Q96G74 571 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 GLIS2Q9BZE0 524 aaPredicted RBP7.1□□□□□ -1.27
TRIM25-208ENST00000574234 GGNBP2Q9H3C7 697 aa7.1□□□□□ -1.27
TRIM25-208ENST00000574234 GNEQ9Y223 722 aaKnown RBP7.1□□□□□ -1.27
TRIM25-208ENST00000574234 SPTBN5Q9NRC6 3674 aaKnown RBP7.1□□□□□ -1.27
TRIM25-208ENST00000574234 SLC10A3P09131 477 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 C7P10643 843 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 GCGRP47871 477 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 EIF5P55010 431 aaKnown RBP7.09□□□□□ -1.27
TRIM25-208ENST00000574234 GRIPAP1Q4V328 841 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 AMOTQ4VCS5 1084 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 RDH13Q8NBN7 331 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 CSRNP1Q96S65 589 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 ZNF408Q9H9D4 720 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 MAFBQ9Y5Q3 323 aaPredicted RBP7.09□□□□□ -1.27
TRIM25-208ENST00000574234 EMILIN1Q9Y6C2 1016 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 DDX60Q8IY21 1712 aaKnown RBP7.09□□□□□ -1.27
TRIM25-208ENST00000574234 VCANP13611 3396 aa7.09□□□□□ -1.27
TRIM25-208ENST00000574234 LAMA3Q16787 3333 aa7.09□□□□□ -1.28
TRIM25-208ENST00000574234 ST20-MTHFSA0A0A6YYL1 179 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 NBPF26B4DH59 902 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 NUDT7P0C024 238 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 MTHFSP49914 203 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 PLEKHO1Q53GL0 409 aaPredicted RBP7.08□□□□□ -1.28
TRIM25-208ENST00000574234 CC2D2BQ6DHV5 1058 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 CCDC24Q8N4L8 307 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 ZNF296Q8WUU4 475 aaPredicted RBP7.08□□□□□ -1.28
TRIM25-208ENST00000574234 L3MBTL2Q969R5 705 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 SETDB2Q96T68 719 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 PNMA3Q9UL41 463 aa7.08□□□□□ -1.28
TRIM25-208ENST00000574234 ZNF646O15015 1829 aaPredicted RBP7.07□□□□□ -1.28
TRIM25-208ENST00000574234 ALDH1B1P30837 517 aa7.07□□□□□ -1.28
TRIM25-208ENST00000574234 ZNF157P51786 506 aaPredicted RBP7.07□□□□□ -1.28
TRIM25-208ENST00000574234 HELBQ8NG08 1087 aaPredicted RBP7.07□□□□□ -1.28
TRIM25-208ENST00000574234 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
TRIM25-208ENST00000574234 KHSRPQ92945 711 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRIM25-208ENST00000574234 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.07□□□□□ -1.28
TRIM25-208ENST00000574234 NUP98P52948 1817 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 NPHP1O15259 732 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 GUCA2AQ02747 115 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 MTMR2Q13614 643 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 C1orf141Q5JVX7 400 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 ZNF530Q6P9A1 599 aaPredicted RBP7.06□□□□□ -1.28
TRIM25-208ENST00000574234 OLFM4Q6UX06 510 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 TBC1D9Q6ZT07 1266 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 C2orf69Q8N8R5 385 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 VPS33BQ9H267 617 aa7.06□□□□□ -1.28
TRIM25-208ENST00000574234 GBA2Q9HCG7 927 aaPredicted RBP7.06□□□□□ -1.28
TRIM25-208ENST00000574234 UNCXA6NJT0 531 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 TRIM6-TRIM34B2RNG4 842 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 PPP1R3GB7ZBB8 358 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 CFAP99D6REC4 459 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 GPR25O00155 361 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 CANXP27824 592 aaKnown RBP7.05□□□□□ -1.28
TRIM25-208ENST00000574234 HIRAP54198 1017 aaPredicted RBP7.05□□□□□ -1.28
TRIM25-208ENST00000574234 SEMA3FQ13275 785 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 ARSIQ5FYB1 569 aa7.05□□□□□ -1.28
TRIM25-208ENST00000574234 PACS2Q86VP3 889 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms