RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 CHST3Q7LGC8 479 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 SNX21Q969T3 373 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 MYH14Q7Z406 1995 aaKnown RBP16.66■□□□□ 0.26
TVP23A-207ENST00000573360 PUM3Q15397 648 aaKnown RBP16.66■□□□□ 0.26
TVP23A-207ENST00000573360 MIGA1Q8NAN2 632 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 HAUS7Q99871 368 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 NYXQ9GZU5 481 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 AOX1Q06278 1338 aa16.66■□□□□ 0.26
TVP23A-207ENST00000573360 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
TVP23A-207ENST00000573360 KLRK1P26718 216 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 RAI14Q9P0K7 980 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
TVP23A-207ENST00000573360 CIAO1O76071 339 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
TVP23A-207ENST00000573360 KBTBD3Q8NAB2 608 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 CHMP4CQ96CF2 233 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 KDM4AO75164 1064 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
TVP23A-207ENST00000573360 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
TVP23A-207ENST00000573360 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
TVP23A-207ENST00000573360 GYS1P13807 737 aa16.64■□□□□ 0.25
TVP23A-207ENST00000573360 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
TVP23A-207ENST00000573360 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
TVP23A-207ENST00000573360 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
TVP23A-207ENST00000573360 FOSBP53539 338 aa16.64■□□□□ 0.25
TVP23A-207ENST00000573360 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
TVP23A-207ENST00000573360 LPIN2Q92539 896 aa16.64■□□□□ 0.25
TVP23A-207ENST00000573360 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
TVP23A-207ENST00000573360 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
TVP23A-207ENST00000573360 CIZ1Q9ULV3 898 aaPredicted RBP16.63■□□□□ 0.25
TVP23A-207ENST00000573360 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
TVP23A-207ENST00000573360 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
TVP23A-207ENST00000573360 RAB11FIP4Q86YS3 637 aa16.63■□□□□ 0.25
TVP23A-207ENST00000573360 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
TVP23A-207ENST00000573360 RIMBP2O15034 1052 aa16.63■□□□□ 0.25
TVP23A-207ENST00000573360 MMP10P09238 476 aa16.63■□□□□ 0.25
TVP23A-207ENST00000573360 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
TVP23A-207ENST00000573360 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
TVP23A-207ENST00000573360 HIP1O00291 1037 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 MCMDC2Q4G0Z9 681 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 ST5P78524 1137 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 PRR5LQ6MZQ0 368 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 RAD50Q92878 1312 aa16.62■□□□□ 0.25
TVP23A-207ENST00000573360 FSD2A1L4K1 749 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 CREB3L3Q68CJ9 461 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 OSBP2Q969R2 916 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 PIH1D3Q9NQM4 214 aaKnown RBP16.61■□□□□ 0.25
TVP23A-207ENST00000573360 MINPP1Q9UNW1 487 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 CAVIN1Q6NZI2 390 aaKnown RBP16.61■□□□□ 0.25
TVP23A-207ENST00000573360 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
TVP23A-207ENST00000573360 CAVIN4Q5BKX8 364 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
TVP23A-207ENST00000573360 MROH5Q6ZUA9 1318 aa16.61■□□□□ 0.25
TVP23A-207ENST00000573360 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
TVP23A-207ENST00000573360 HMG20BQ9P0W2 317 aa16.6■□□□□ 0.25
TVP23A-207ENST00000573360 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
TVP23A-207ENST00000573360 RNF113AO15541 343 aaKnown RBP16.6■□□□□ 0.25
TVP23A-207ENST00000573360 M0R2C6 588 aa16.6■□□□□ 0.25
TVP23A-207ENST00000573360 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
TVP23A-207ENST00000573360 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
TVP23A-207ENST00000573360 G3V3G9 751 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 HSPA4P34932 840 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 DCAF8Q5TAQ9 597 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
TVP23A-207ENST00000573360 DDR1Q08345 913 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
TVP23A-207ENST00000573360 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.25
TVP23A-207ENST00000573360 BAG4O95429 457 aaKnown RBP16.58■□□□□ 0.25
TVP23A-207ENST00000573360 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.25
TVP23A-207ENST00000573360 PDRG1Q9NUG6 133 aa16.58■□□□□ 0.25
TVP23A-207ENST00000573360 CYP46A1Q9Y6A2 500 aa16.58■□□□□ 0.25
TVP23A-207ENST00000573360 ZNF532Q9HCE3 1301 aa16.58■□□□□ 0.25
TVP23A-207ENST00000573360 SLC27A2O14975 620 aa16.58■□□□□ 0.24
TVP23A-207ENST00000573360 SLC27A3Q5K4L6 730 aa16.58■□□□□ 0.24
TVP23A-207ENST00000573360 ESPNB1AK53 854 aa16.58■□□□□ 0.24
TVP23A-207ENST00000573360 PKP1Q13835 747 aa16.58■□□□□ 0.24
TVP23A-207ENST00000573360 LAMB4A4D0S4 1761 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
TVP23A-207ENST00000573360 NASPP49321 788 aaPredicted RBP16.57■□□□□ 0.24
TVP23A-207ENST00000573360 AK2P54819 239 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 GPR108Q9NPR9 543 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 MAST3O60307 1309 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 ZNF609O15014 1411 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 GPAA1O43292 621 aa16.57■□□□□ 0.24
TVP23A-207ENST00000573360 UFL1O94874 794 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms